RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HTR6P50406 440 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 MMP15P51511 669 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SMSP52788 366 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 NAGLUP54802 743 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 BRWD1-AS2P59051 145 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CRADDP78560 199 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 FOLH1Q04609 750 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RUNX1T1Q06455 604 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 MZT1Q08AG7 82 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 HSPA14Q0VDF9 509 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PRKAA1Q13131 559 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TFDP2Q14188 446 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 POU6F1Q14863 301 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SLC10A1Q14973 349 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 EXT1Q16394 746 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 KLHL38Q2WGJ6 581 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SFT2D3Q587I9 215 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PIGGQ5H8A4 983 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PDSS1Q5T2R2 415 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 GRTP1Q5TC63 336 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ANKRD22Q5VYY1 191 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SHEQ5VZ18 495 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ADNP2Q6IQ32 1131 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ARHGAP11AQ6P4F7 1023 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF449Q6P9G9 518 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SBSNQ6UWP8 590 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ARSKQ6UWY0 536 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PLXDC2Q6UX71 529 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 MBOAT1Q6ZNC8 495 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 Q71RC1 249 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TUBA1AQ71U36 451 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 EXOC3L1Q86VI1 746 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SLC26A11Q86WA9 606 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CNTN4Q8IWV2 1026 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 KLHL7Q8IXQ5 586 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TIGD4Q8IY51 512 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 LRRC75A-AS1Q8N1F1 130 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CA13Q8N1Q1 262 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 L3MBTL4Q8NA19 623 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 MFSD9Q8NBP5 474 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 OR2M7Q8NG81 312 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 OR4L1Q8NH43 312 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 OR8K3Q8NH51 312 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RNF128Q8TEB7 428 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PAQR8Q8TEZ7 354 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF721Q8TF20 911 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SCARB1Q8WTV0 552 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 FAM222BQ8WU58 562 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SSMEM1Q8WWF3 244 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ASZ1Q8WWH4 475 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SMPDL3AQ92484 453 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ELMO1Q92556 727 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 P3H4Q92791 437 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 UCN3Q969E3 161 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RAD51AP1Q96B01 352 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF524Q96C55 264 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 HAUS1Q96CS2 278 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 WDR34Q96EX3 536 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 THOC1Q96FV9 657 aaKnown RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 OTUB1Q96FW1 271 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF479Q96JC4 524 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 LYZL4Q96KX0 146 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF354BQ96LW1 612 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SGK494Q96LW2 274 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TTC25Q96NG3 672 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PRAP1Q96NZ9 151 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RASL10BQ96S79 203 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CPNE1Q99829 537 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TUBA1CQ9BQE3 449 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PIGQQ9BRB3 760 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 KATNB1Q9BVA0 655 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TTTY12Q9BZ98 90 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 DRC3Q9H069 523 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CSTL1Q9H114 145 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 FN3KQ9H479 309 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 LIN28AQ9H9Z2 209 aaKnown RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 FANCEQ9HB96 536 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 MYNNQ9NPC7 610 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 KLHL1Q9NR64 748 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 KLHL8Q9P2G9 620 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RSPH14Q9UHP6 348 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CRLS1Q9UJA2 301 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RNF150Q9ULK6 438 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF490Q9ULM2 529 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 PLEKHA6Q9Y2H5 1048 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 DHRS7Q9Y394 339 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ATG4BQ9Y4P1 393 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 WIF1Q9Y5W5 379 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RAI1Q7Z5J4 1906 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 KIAA1549Q9HCM3 1950 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SCN2AQ99250 2005 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 HEATR5BQ9P2D3 2071 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ALPK2Q86TB3 2170 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 IGLV5-45A0A087WSX0 123 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GOLGA8QA0A0J9YX86 632 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 A0A1W2PRB8 838 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 A0A1W2PS18 150 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PLSCR5A0PG75 271 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 GOLGA8OA6NCC3 632 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 LRIT2A6NDA9 550 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms