RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 OR4F6Q8NGB9 312 aa11.34□□□□□ -0.59
SNRPF-203ENST00000551316 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
SNRPF-203ENST00000551316 C16orf58Q96GQ5 468 aa11.34□□□□□ -0.59
SNRPF-203ENST00000551316 NAT9Q9BTE0 207 aa11.34□□□□□ -0.59
SNRPF-203ENST00000551316 VPS11Q9H270 941 aa11.34□□□□□ -0.59
SNRPF-203ENST00000551316 C3orf14Q9HBI5 128 aa11.34□□□□□ -0.59
SNRPF-203ENST00000551316 SLC9A8Q9Y2E8 581 aa11.34□□□□□ -0.59
SNRPF-203ENST00000551316 GPR137BO60478 399 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 ERLIN1O75477 346 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 RSL1D1O76021 490 aaKnown RBP11.33□□□□□ -0.6
SNRPF-203ENST00000551316 IGHMP01871 453 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 GFAPP14136 432 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 HPGDP15428 266 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 STMN1P16949 149 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 CD80P33681 288 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 IFT88Q13099 833 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 DOC2BQ14184 412 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 KLHL26Q53HC5 615 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 TECRLQ5HYJ1 363 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 EXOSC6Q5RKV6 272 aaKnown RBP11.33□□□□□ -0.6
SNRPF-203ENST00000551316 CASC10Q5T4H9 136 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 C1QTNF12Q5T7M4 302 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 USP51Q70EK9 711 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 C11orf44Q8N8P7 122 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 OR52E2Q8NGJ4 325 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 KIF18AQ8NI77 898 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 RBMXL1Q96E39 390 aaKnown RBP11.33□□□□□ -0.6
SNRPF-203ENST00000551316 APIPQ96GX9 242 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF385DQ9H6B1 395 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 NPHS2Q9NP85 383 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF225Q9UK10 706 aa11.33□□□□□ -0.6
SNRPF-203ENST00000551316 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 ISPDA4D126 451 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CLDN25C9JDP6 229 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 BCAS1O75363 584 aaPredicted RBP11.32□□□□□ -0.6
SNRPF-203ENST00000551316 UPK3AO75631 287 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 PMS2P2O95744 297 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CLPTM1O96005 669 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 FAM157BP0CG42 384 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 TFPIP10646 304 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 IMPDH2P12268 514 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CBR1P16152 277 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 TSPAN8P19075 237 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 MAKP20794 623 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CRYBB2P43320 205 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 SELENOPP49908 381 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 SESN3P58005 492 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CD69Q07108 199 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 MERTKQ12866 999 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 HSPB3Q12988 150 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 FRG1Q14331 258 aaKnown RBP11.32□□□□□ -0.6
SNRPF-203ENST00000551316 Q6YL49 198 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CDC26Q8NHZ8 85 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 SELENOMQ8WWX9 145 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 TMEM45BQ96B21 275 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 ELOVL6Q9H5J4 265 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 CTPS2Q9NRF8 586 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 PCTPQ9UKL6 214 aa11.32□□□□□ -0.6
SNRPF-203ENST00000551316 GNG14A0A1W2PPG7 69 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 A0A1W2PPW3 197 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 C3orf84H3BNL1 204 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-203ENST00000551316 MAGEA8P43361 318 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 FNTAP49354 379 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 HTR6P50406 440 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 CCNG1P51959 295 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 PRKAG1P54619 331 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 ALDH18A1P54886 795 aaKnown RBP11.31□□□□□ -0.6
SNRPF-203ENST00000551316 OR2B6P58173 313 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 EGR3Q06889 387 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 FXNQ16595 210 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 SPRNQ5BIV9 151 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 REP15Q6BDI9 236 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 CDC73Q6P1J9 531 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 PAQR6Q6TCH4 344 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 LRIG3Q6UXM1 1119 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
SNRPF-203ENST00000551316 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 OR10S1Q8NGN2 331 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 OR6Y1Q8NGX8 325 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 OR5W2Q8NH69 310 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 CDS1Q92903 461 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF837Q96EG3 531 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-203ENST00000551316 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 SHCBP1LQ9BZQ2 653 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 CPSF2Q9P2I0 782 aaKnown RBP11.31□□□□□ -0.6
SNRPF-203ENST00000551316 HECTD4Q9Y4D8 3996 aa11.31□□□□□ -0.6
SNRPF-203ENST00000551316 C17orf100A8MU93 164 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 TMEM229AB2RXF0 380 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 NPIPB9F8W1W9 429 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF500O60304 480 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ULK1O75385 1050 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 FOXH1O75593 365 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 IPO7O95373 1038 aaKnown RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 PRPS2P11908 318 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms