RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SHISA8B8ZZ34 492 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 NAGAP17050 411 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 GADD45AP24522 165 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 HTR1FP30939 366 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 RAB40BQ12829 278 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 OR2G6Q5TZ20 316 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 SIRT6Q8N6T7 355 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 SDR9C7Q8NEX9 313 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 OR51V1Q9H2C8 321 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 NANSQ9NR45 359 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 ERGIC3Q9Y282 383 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 NSG1A0A0A6YYJ2 146 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 TMEM72A0PK05 275 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 RPL4P36578 427 aaKnown RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 RGS6P49758 472 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 ERVK-25P63136 954 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 C17orf67Q0P5P2 114 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 TSTQ16762 297 aaKnown RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 KLHL12Q53G59 568 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 KLHL22Q53GT1 634 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 ZNF367Q7RTV3 350 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 PIP4P1Q86T03 277 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 LHFPL3Q86UP9 236 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 OR52E2Q8NGJ4 325 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 SLC22A8Q8TCC7 542 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 SMAP2Q8WU79 429 aaPredicted RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 KISS1RQ969F8 398 aaPredicted RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 SPACA9Q96E40 222 aaPredicted RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 OPALINQ96PE5 141 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 CCNL2Q96S94 520 aaPredicted RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 ZPBPQ9BS86 351 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 OR11A1Q9GZK7 315 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 FGF20Q9NP95 211 aaPredicted RBP17.88■□□□□ 0.45
SSH1-209ENST00000551165 NCDNQ9UBB6 729 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 VDAC3Q9Y277 283 aa17.88■□□□□ 0.45
SSH1-209ENST00000551165 CCDC187A0A096LP49 1063 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 TMED7-TICAM2A0A0A6YYA0 188 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 ASAH2BP0C7U1 165 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 Q0VFX4 171 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 SSX1Q16384 188 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 NTRK2Q16620 822 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 ZNF791Q3KP31 576 aaPredicted RBP17.87■□□□□ 0.45
SSH1-209ENST00000551165 IL20RBQ6UXL0 311 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 DEFB124Q8NES8 71 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 OR9Q1Q8NGQ5 310 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 ZPLD1Q8TCW7 415 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 TTC9Q92623 222 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 RFKQ969G6 155 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 FN3KQ9H479 309 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 RNF167Q9H6Y7 350 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 H2AFY2Q9P0M6 372 aaPredicted RBP17.87■□□□□ 0.45
SSH1-209ENST00000551165 TMED7Q9Y3B3 224 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 TNFRSF10AO00220 468 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 SUSD5O60279 629 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 LIMS3P0CW19 117 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 LIMS4P0CW20 117 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 TCEA1P23193 301 aaKnown RBP17.87■□□□□ 0.45
SSH1-209ENST00000551165 SPHARQ15513 63 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 EXT1Q16394 746 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 NDUFAF7Q7L592 441 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 OR51G2Q8NGK0 314 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 RASD2Q96D21 266 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 KATNB1Q9BVA0 655 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 OR51E2Q9H255 320 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 CDCP1Q9H5V8 836 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 METTL7AQ9H8H3 244 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 C12orf10Q9HB07 376 aa17.87■□□□□ 0.45
SSH1-209ENST00000551165 FARSAQ9Y285 508 aaKnown RBP17.87■□□□□ 0.45
SSH1-209ENST00000551165 RIIAD1A6NNX1 92 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PRR23D1E9PI22 279 aaPredicted RBP17.86■□□□□ 0.45
SSH1-209ENST00000551165 F13BP05160 661 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PRR23D2P0DMB1 279 aaPredicted RBP17.86■□□□□ 0.45
SSH1-209ENST00000551165 ENDOUP21128 410 aaKnown RBP17.86■□□□□ 0.45
SSH1-209ENST00000551165 CASP3P42574 277 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PRAMEF20Q5VT98 475 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 MEPCEQ7L2J0 689 aaKnown RBP17.86■□□□□ 0.45
SSH1-209ENST00000551165 M1APQ8TC57 530 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PTDSS2Q9BVG9 487 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 NRIP3Q9NQ35 241 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PCDHGA1Q9Y5H4 931 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 CCDC182A6NF36 153 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 SNTNA6NMZ2 147 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 LRRTM2O43300 516 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 AHCYL1O43865 530 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 SERPINI2O75830 405 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PRKCAP17252 672 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 HK1P19367 917 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 POLR2HP52434 150 aaKnown RBP17.86■□□□□ 0.45
SSH1-209ENST00000551165 SLC16A1P53985 500 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 FOXK1P85037 733 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 MISPQ8IVT2 679 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 LRRC75AQ8NAA5 344 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 PROKR2Q8NFJ6 384 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 OR51L1Q8NGJ5 315 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 ZNRF4Q8WWF5 429 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 LIPHQ8WWY8 451 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 ZNF649Q9BS31 505 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 MND1Q9BWT6 205 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 HIF3AQ9Y2N7 669 aa17.86■□□□□ 0.45
SSH1-209ENST00000551165 MRPS18BQ9Y676 258 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms