RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 KLHL4Q9C0H6 718 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 METTL7AQ9H8H3 244 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 CNOT10Q9H9A5 744 aaKnown RBP3.13□□□□□ -1.91
LIMA1-206ENST00000550611 POPDC3Q9HBV1 291 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 LYARQ9NX58 379 aaKnown RBP3.13□□□□□ -1.91
LIMA1-206ENST00000550611 LIPT1Q9Y234 373 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF337Q9Y3M9 751 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF175Q9Y473 711 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 MAGED1Q9Y5V3 778 aaPredicted RBP3.13□□□□□ -1.91
LIMA1-206ENST00000550611 DSCAMO60469 2012 aa3.13□□□□□ -1.91
LIMA1-206ENST00000550611 DYNC2H1Q8NCM8 4307 aaKnown RBP3.13□□□□□ -1.91
LIMA1-206ENST00000550611 ARHGAP21Q5T5U3 1957 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 FREM1Q5H8C1 2179 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ALPK2Q86TB3 2170 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CADP27708 2225 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GOLGA8QA0A0J9YX86 632 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR2M5A3KFT3 312 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GOLGA8OA6NCC3 632 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 DPRXA6NFQ7 191 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 NCF1BA6NI72 391 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 C17orf51A8MQB3 221 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 NCF1CA8MVU1 366 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GOLGA8NF8WBI6 632 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 H0YIV9 168 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GOLGA8RI6L899 631 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 FOXE1O00358 373 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 DNALI1O14645 258 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 FADS1O60427 444 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 SS18L1O75177 396 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GCM2O75603 506 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 AQP8O94778 261 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ATP1B1P05026 303 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CT45A8P0DMV1 189 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CT45A9P0DMV2 189 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 IGHV4-31P0DP07 118 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 NEFHP12036 1026 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CPMP14384 443 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 NCF1P14598 390 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 PORP16435 677 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ITGA2P17301 1181 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 DPP4P27487 766 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CDKN1AP38936 164 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 SLC6A8P48029 635 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 PCP4P48539 62 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 EMDP50402 254 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF75DP51815 510 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CLDN20P56880 219 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 RPL15P61313 204 aaKnown RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ATP6V0D1P61421 351 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 SIRPAP78324 504 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 MFSD13AQ14CX5 517 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 PON3Q15166 354 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CTU2Q2VPK5 515 aaKnown RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 TBRG1Q3YBR2 411 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 KBTBD12Q3ZCT8 623 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF672Q499Z4 452 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GLYR1Q49A26 553 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 TRMT12Q53H54 448 aaKnown RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 CT45A2Q5DJT8 189 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 RNASE12Q5GAN4 147 aaKnown RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 LIPJQ5W064 366 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR5M10Q6IEU7 315 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR52E8Q6IFG1 317 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 C11orf71Q6IPW1 123 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 WDR93Q6P2C0 686 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ACSM6Q6P461 480 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 FRA10AC1Q70Z53 315 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 LRRC70Q7Z2Q7 622 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 P4HA3Q7Z4N8 544 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 BCDIN3DQ7Z5W3 292 aaKnown RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ISCA2Q86U28 154 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 EXOC3L1Q86VI1 746 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 SPATA6LQ8N4H0 392 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 GBP7Q8N8V2 638 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 SNX31Q8N9S9 440 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 MNS1Q8NEH6 495 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR2M3Q8NG83 312 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR4K14Q8NGD5 310 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR52L2PQ8NGH6 319 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 OR6K3Q8NGY3 331 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 WDR20Q8TBZ3 569 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 UBTD2Q8WUN7 234 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 MAGOHBQ96A72 148 aaKnown RBP3.12□□□□□ -1.91
LIMA1-206ENST00000550611 TMCO6Q96DC7 493 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 LRRC39Q96DD0 335 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 MPP4Q96JB8 637 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ADGRG7Q96K78 797 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF681Q96N22 645 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 COL21A1Q96P44 957 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 BTBD9Q96Q07 612 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 RHNO1Q9BSD3 238 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ELOVL1Q9BW60 279 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 PINK1Q9BXM7 581 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 HDHD5Q9BXW7 423 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ITPAQ9BY32 194 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 RTN4RQ9BZR6 473 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 TRIM2Q9C040 744 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 ACTR6Q9GZN1 396 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 TSPY26PQ9H489 355 aa3.12□□□□□ -1.91
LIMA1-206ENST00000550611 PLEKHA2Q9HB19 425 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms