RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SPIN1Q9Y657 262 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 IGHV3-15A0A0B4J1V0 119 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 CD8B2A6NJW9 211 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 LIPT2A6NK58 231 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 LRRN3E7EW58 273 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 E9PLN8 166 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 SULT2B1O00204 365 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 CCL21O00585 134 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 LRRTM2O43300 516 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 PIP5K1CO60331 668 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 AQP8O94778 261 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 GPIP06744 558 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 HOXD4P09016 255 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 RAP2AP10114 183 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 ENPP1P22413 925 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 SLC7A1P30825 629 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 PTGER4P35408 488 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 RPS5P46782 204 aaKnown RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 AGFG1P52594 562 aaKnown RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 NUP107P57740 925 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 OR2B6P58173 313 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 RAC3P60763 192 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 RPS3AP61247 264 aaKnown RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 H3F3AP84243 136 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 TRAM2Q15035 370 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 PON3Q15166 354 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 SEC23BQ15437 767 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 TTC33Q6PID6 262 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 PFN4Q8NHR9 129 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 ROBO4Q8WZ75 1007 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 DUS3LQ96G46 650 aaKnown RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 MOGAT1Q96PD6 335 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 VKORC1Q9BQB6 163 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 VNN3Q9NY84 501 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 SELENONQ9NZV5 590 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 TESMINQ9Y4I5 508 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 RELNP78509 3460 aa11.67□□□□□ -0.54
RAB5C-206ENST00000550406 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
RAB5C-206ENST00000550406 TRAV36DV7A0A075B6V5 113 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 A0A087WUU8 490 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 TRBV4-1A0A0J9YWV2 114 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 A0A1W2PRQ8 180 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 MBD3L4A6NDZ8 208 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 MBD3L3A6NE82 208 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ERICH4A6NGS2 130 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 MBD3L5A6NJ08 208 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 J3QKU1 62 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 SMAD9O15198 467 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 RAMP1O60894 148 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 FKBP6O75344 327 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 CIB2O75838 187 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 H1F0P07305 194 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ITGA2P17301 1181 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 FPR1P21462 350 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 CEACAM8P31997 349 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 IDUAP35475 653 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 RBM34P42696 430 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 LIMS1P48059 325 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 P2RY4P51582 365 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 HMGA2P52926 109 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ACTR3P61158 418 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ADORA2A-AS1P86434 159 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 PMPCAQ10713 525 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 DGCR6Q14129 220 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 OR7A5Q15622 319 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 SGCBQ16585 318 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ZNF239Q16600 458 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 PDSS1Q5T2R2 415 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 PODNL1Q6PEZ8 512 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 B3GNT6Q6ZMB0 384 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 NAXEQ8NCW5 288 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 MBD3L2Q8NHZ7 208 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 TMEM239Q8WW34 195 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 WNT2BQ93097 391 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 POP5Q969H6 163 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 HS6ST2Q96MM7 605 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 DENND2DQ9H6A0 471 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 C20orf141Q9NUB4 165 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 SEC14L4Q9UDX3 406 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ERRFI1Q9UJM3 462 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ING1Q9UK53 422 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 AURKCQ9UQB9 309 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 FAM32AQ9Y421 112 aaKnown RBP11.66□□□□□ -0.54
RAB5C-206ENST00000550406 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
RAB5C-206ENST00000550406 A0A1B0GUH1 482 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 SLC22A20A6NK97 555 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 KPNA4O00629 521 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-206ENST00000550406 AKR7A3O95154 331 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 AHSA1O95433 338 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 CBLP22681 906 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 RRM2P31350 389 aa11.65□□□□□ -0.54
RAB5C-206ENST00000550406 TIMP3P35625 211 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms