RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OR52N5Q8NH56 324 aa14.4□□□□□ -0.1
VPS29-207ENST00000549970 SMAP2Q8WU79 429 aaPredicted RBP14.4□□□□□ -0.1
VPS29-207ENST00000549970 MAL2Q969L2 176 aa14.4□□□□□ -0.1
VPS29-207ENST00000549970 EBF4Q9BQW3 602 aa14.4□□□□□ -0.1
VPS29-207ENST00000549970 PAIP1Q9H074 479 aaKnown RBP14.4□□□□□ -0.1
VPS29-207ENST00000549970 THUMPD1Q9NXG2 353 aaKnown RBP14.4□□□□□ -0.1
VPS29-207ENST00000549970 NPAP1Q9NZP6 1156 aa14.4□□□□□ -0.1
VPS29-207ENST00000549970 SLC9A8Q9Y2E8 581 aa14.4□□□□□ -0.1
VPS29-207ENST00000549970 MAGED1Q9Y5V3 778 aaPredicted RBP14.4□□□□□ -0.1
VPS29-207ENST00000549970 FLVCR1Q9Y5Y0 555 aa14.4□□□□□ -0.1
VPS29-207ENST00000549970 A0A0G2JPF8 293 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 A0A1W2PP18 115 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 A0A1W2PR80 420 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 OR5H1A6NKK0 313 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 FAM171A2A8MVW0 826 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 HNRNPCL2B2RXH8 293 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 HNRNPCL3B7ZW38 293 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 CLIC1O00299 241 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 HNRNPCL1O60812 293 aaKnown RBP14.39□□□□□ -0.11
VPS29-207ENST00000549970 LY6G6DO95868 133 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 GPIP06744 558 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 HEXAP06865 529 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 THBS1P07996 1170 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 DANCRP0C864 163 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 HNRNPCL4P0DMR1 293 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 PRG2P13727 222 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 NCF2P19878 526 aaPredicted RBP14.39□□□□□ -0.11
VPS29-207ENST00000549970 IDUAP35475 653 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 FOXG1P55316 489 aaPredicted RBP14.39□□□□□ -0.11
VPS29-207ENST00000549970 BNIP2Q12982 314 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 CEACAM7Q14002 265 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 RGNQ15493 299 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 OR7A5Q15622 319 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 OTUD3Q5T2D3 398 aaPredicted RBP14.39□□□□□ -0.11
VPS29-207ENST00000549970 RNF220Q5VTB9 566 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 WBP2NLQ6ICG8 309 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 PAQR6Q6TCH4 344 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 SERPINA11Q86U17 422 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 P2RY8Q86VZ1 359 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 DYDC1Q8WWB3 177 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 GTPBP3Q969Y2 492 aaKnown RBP14.39□□□□□ -0.11
VPS29-207ENST00000549970 ATP6V1G3Q96LB4 118 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 TRIM2Q9C040 744 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 TAS2R16Q9NYV7 291 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 UPB1Q9UBR1 384 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 MALT1Q9UDY8 824 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 ZNF232Q9UNY5 417 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 CHST2Q9Y4C5 530 aa14.39□□□□□ -0.11
VPS29-207ENST00000549970 A0A096LPI6 279 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 LIPT2A6NK58 231 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 NR5A2O00482 541 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 ABCD4O14678 606 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 AKR7A3O95154 331 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 TGDSO95455 350 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 ITGA5P08648 1049 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 CDKN1AP38936 164 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 IDH3AP50213 366 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 CDH11P55287 796 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 FADDQ13158 208 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 SLC17A1Q14916 467 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 PGGHGQ32M88 737 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 TTMPQ5BVD1 217 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 ZNF311Q5JNZ3 666 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 C9orf135Q5VTT2 229 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 SSX8Q7RTT4 187 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 FUNDC1Q8IVP5 155 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 GOLGA6L1Q8N7Z2 621 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 TMEM99Q8N816 258 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 SPATA9Q9BWV2 254 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 RAD21L1Q9H4I0 556 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 ARMC7Q9H6L4 198 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 ADPRHL2Q9NX46 363 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 CCDC167Q9P0B6 97 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 IFT52Q9Y366 437 aa14.38□□□□□ -0.11
VPS29-207ENST00000549970 SHISA9B4DS77 424 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 C5orf58C9J3I9 102 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 FRS3O43559 492 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 HOXB9P17482 250 aaPredicted RBP14.37□□□□□ -0.11
VPS29-207ENST00000549970 MRPL19P49406 292 aaKnown RBP14.37□□□□□ -0.11
VPS29-207ENST00000549970 ZNF83P51522 516 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 HOXC5Q00444 222 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 ZSWIM7Q19AV6 140 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 GPAT4Q86UL3 456 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 BBS10Q8TAM1 723 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 SPDL1Q96EA4 605 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 TAPBPLQ9BX59 468 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 BCL2L10Q9HD36 194 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 A4GALTQ9NPC4 353 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 SLC7A10Q9NS82 523 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 PARPBPQ9NWS1 579 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 SLC25A37Q9NYZ2 338 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 CISD1Q9NZ45 108 aaKnown RBP14.37□□□□□ -0.11
VPS29-207ENST00000549970 SLAMF8Q9P0V8 285 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 SLC25A15Q9Y619 301 aa14.37□□□□□ -0.11
VPS29-207ENST00000549970 NSD1Q96L73 2696 aaPredicted RBP14.36□□□□□ -0.11
VPS29-207ENST00000549970 AQP7P3A6NL99 342 aa14.36□□□□□ -0.11
VPS29-207ENST00000549970 A8MVM7 634 aa14.36□□□□□ -0.11
VPS29-207ENST00000549970 OVOL3O00110 214 aa14.36□□□□□ -0.11
VPS29-207ENST00000549970 BMP2P12643 396 aa14.36□□□□□ -0.11
VPS29-207ENST00000549970 AQP5P55064 265 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms