RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 KLK11Q9UBX7 282 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 FCARP24071 287 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 PITPNAQ00169 270 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 STX4Q12846 297 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 GPM6BQ13491 265 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 CDK5R1Q15078 307 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 PON3Q15166 354 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 TRAM1Q15629 374 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 GSG1Q2KHT4 349 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 TMEM255AQ5JRV8 349 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 FAM109BQ6ICB4 259 aaPredicted RBP10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 RPL13AP3Q6NVV1 102 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 RTL10Q7L3V2 364 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 FCRLAQ7L513 359 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SLC38A6Q8IZM9 456 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 UXS1Q8NBZ7 420 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 OR8K3Q8NH51 312 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SLC22A18Q96BI1 424 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 CLIP3Q96DZ5 547 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 OR2M2Q96R28 347 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 ZFYVE21Q9BQ24 234 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 INPP5EQ9NRR6 644 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 DUSP22Q9NRW4 184 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 PRUNE2Q8WUY3 3088 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 BLOC1S5-TXNDC5H3BN57 136 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 HCRTR1O43613 425 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 BRINP1O60477 761 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 PTP4A3O75365 173 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 RAF1P04049 648 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SLC2A5P22732 501 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 LSSP48449 732 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SELENOPP49908 381 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 ARFIP1P53367 373 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 ACTC1P68032 377 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 ACTA1P68133 377 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 C19orf57Q0VDD7 668 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SMUG1Q53HV7 270 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 ARHGAP11AQ6P4F7 1023 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 KIRREL2Q6UWL6 708 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 FTMTQ8N4E7 242 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 OR9A4Q8NGU2 314 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 OR52I2Q8NH67 350 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 SEC22CQ9BRL7 303 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 TSPAN10Q9H1Z9 355 aaPredicted RBP10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 NARFLQ9H6Q4 476 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 EMC7Q9NPA0 242 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 NPFFR2Q9Y5X5 522 aa10.97□□□□□ -0.65
RAPGEF3-219ENST00000549151 A0A0B4J2E0 115 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 A0A1B0GX12 115 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 GATBO75879 557 aaKnown RBP10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 ZNF250P15622 560 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 RPS27P42677 84 aaKnown RBP10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 HYAL4Q2M3T9 481 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 PRICKLE4Q2TBC4 344 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 LGALSLQ3ZCW2 172 aaPredicted RBP10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 FHL5Q5TD97 284 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 CD276Q5ZPR3 534 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 KIAA1324Q6UXG2 1013 aaKnown RBP10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 CHMP1BQ7LBR1 199 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 PARGQ86W56 976 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 ZNF511Q8NB15 262 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 ADAMTS14Q8WXS8 1223 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 MSANTD3Q96H12 275 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 MED30Q96HR3 178 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 LMAN2LQ9H0V9 348 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 C20orf85Q9H1P6 137 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 HRASLS2Q9NWW9 162 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 KLF15Q9UIH9 416 aa10.96□□□□□ -0.65
RAPGEF3-219ENST00000549151 ARPC1BO15143 372 aaKnown RBP10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 SERPINA3P01011 423 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 MMP15P51511 669 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 SNTA1Q13424 505 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 ZNF267Q14586 743 aaPredicted RBP10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 METTL27Q8N6F8 245 aaPredicted RBP10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 DNAAF1Q8NEP3 725 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 LRRC20Q8TCA0 184 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 B3GNT2Q9NY97 397 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 GLTPQ9NZD2 209 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 ZNF224Q9NZL3 707 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 NTMQ9P121 344 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 HCN3Q9P1Z3 774 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 DTX4Q9Y2E6 619 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 SC5DO75845 299 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 NDUFB2O95178 105 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 IGKV1D-16P01601 117 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 TSPAN5P62079 268 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 EXOSC2Q13868 293 aaKnown RBP10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 TMEM196Q5HYL7 178 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 PARM1Q6UWI2 310 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 Q6ZTK2 550 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 CSNK1A1LQ8N752 337 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 C1orf216Q8TAB5 229 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 NT5CQ8TCD5 201 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 FGF14Q92915 247 aa10.96□□□□□ -0.66
RAPGEF3-219ENST00000549151 SPACA7Q96KW9 195 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms