RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TFAP2EQ6VUC0 442 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 STK32CQ86UX6 486 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 CCDC103Q8IW40 242 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 SLC15A3Q8IY34 581 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 SLC26A7Q8TE54 656 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 CMTM5Q96DZ9 223 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 ARHGDIGQ99819 225 aa16.65■□□□□ 0.26
PRPF40B-206ENST00000547764 LIPT2A6NK58 231 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 ELOA3DA6NLF2 546 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 ZNF716A6NP11 495 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 FAM220BPB1ANY3 271 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 C16orf97H3BN30 126 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 M0R3H8 397 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 EIF1BO60739 113 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 GPIP06744 558 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 PRDX6P30041 224 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 CCKARP32238 428 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 OR1Q1Q15612 314 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 OR7A5Q15622 319 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 NRF1Q16656 503 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 ELOA3BQ3SY89 546 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 C1orf140Q5VVS0 124 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 C8orf82Q6P1X6 216 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 HACD2Q6Y1H2 254 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 BEND4Q6ZU67 534 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 ARPINQ7Z6K5 226 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 RANBP3LQ86VV4 465 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 ELOA3Q8NG57 546 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 OR2T12Q8NG77 320 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 PIGXQ8TBF5 258 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 STK35Q8TDR2 534 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 DNAJA4Q8WW22 397 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 LURAP1Q96LR2 239 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 DACH2Q96NX9 599 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 HOPXQ9BPY8 73 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 NAA11Q9BSU3 229 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 C12orf10Q9HB07 376 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 TMEM27Q9HBJ8 222 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 NDRG3Q9UGV2 375 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 ARL2BPQ9Y2Y0 163 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 TEX15Q9BXT5 2789 aa16.64■□□□□ 0.25
PRPF40B-206ENST00000547764 FREM1Q5H8C1 2179 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 IGKV3D-15A0A087WSY6 115 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 SH3D21A4FU49 640 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 NUDT2P50583 147 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 EGR4Q05215 589 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 DAZAP2Q15038 168 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 NPTX1Q15818 432 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 ALG10BQ5I7T1 473 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 FAM91A1Q658Y4 838 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 ULK3Q6PHR2 472 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 PAQR6Q6TCH4 344 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 GALNT5Q7Z7M9 940 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 MICU2Q8IYU8 434 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 OR4D11Q8NGI4 311 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 OR6T1Q8NGN1 323 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 RASSF5Q8WWW0 418 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 WFIKKN1Q96NZ8 548 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 MCHR1Q99705 422 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 TAPBPLQ9BX59 468 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 KLHL4Q9C0H6 718 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 EMC3Q9P0I2 261 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 AP3M1Q9Y2T2 418 aa16.63■□□□□ 0.25
PRPF40B-206ENST00000547764 A0A0B4J2E0 115 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 A0A1B0GX12 115 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 ELOVL7A1L3X0 281 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 FAM221AA4D161 298 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 A6NNC1 897 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 FMO6PO60774 539 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 CTAG2O75638 210 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 AKR7A3O95154 331 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 AHSA1O95433 338 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 PNMTP11086 282 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 EDNRAP25101 427 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 OR3A2P47893 321 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC7A2P52569 658 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC16A1P53985 500 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 LIPEQ05469 1076 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 STAC2Q6ZMT1 411 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 TMEM200AQ86VY9 491 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 RBM45Q8IUH3 476 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 TMEM99Q8N816 258 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 VANGL1Q8TAA9 524 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC38A4Q969I6 547 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 KTI12Q96EK9 354 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 SLC47A1Q96FL8 570 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 CCT8L2Q96SF2 557 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 PTDSS2Q9BVG9 487 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 FANCFQ9NPI8 374 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 ADPRHL2Q9NX46 363 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 FAM53CQ9NYF3 392 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 SELENONQ9NZV5 590 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 TESMINQ9Y4I5 508 aa16.62■□□□□ 0.25
PRPF40B-206ENST00000547764 IGKV1D-42A0A075B6H8 117 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 NME4O00746 187 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 KDELR2P33947 212 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 RPS5P46782 204 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 CDH12P55289 794 aa16.61■□□□□ 0.25
PRPF40B-206ENST00000547764 OTUD3Q5T2D3 398 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms