RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CTBP2P56545 445 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 HSD17B7P56937 341 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 PRKCDQ05655 676 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF57Q68EA5 555 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ESPNLQ6ZVH7 1005 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF550Q7Z398 422 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 OR5M1Q8NGP8 315 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 OR5W2Q8NH69 310 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ASB15Q8WXK1 588 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 NEURL2Q9BR09 285 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 VN1R1Q9GZP7 353 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 GALNT9Q9HCQ5 603 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 SLC35A3Q9Y2D2 325 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 DNAJC13O75165 2243 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 POLR1CO15160 346 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-209ENST00000547018 AK1P00568 194 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 IGLV3-19P01714 112 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 CPEP16870 476 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 SQSTM1Q13501 440 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 NIPAL1Q6NVV3 410 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 GDPD3Q7L5L3 318 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF615Q8N8J6 731 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 BCL7BQ9BQE9 202 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 SLC25A18Q9H1K4 315 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 BRD7Q9NPI1 651 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 UBQLN4Q9NRR5 601 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 PRODH2Q9UF12 536 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 OR6C68A6NDL8 312 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 H3BML4 177 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ALOX12BO75342 701 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 NDUFB2O95178 105 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 HLA-DPB1P04440 258 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 CXCR1P25024 350 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 DEFA1P59665 94 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 DEFA3P59666 94 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 PON3Q15166 354 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 WDR45BQ5MNZ6 344 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 DDI2Q5TDH0 399 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 GARNL3Q5VVW2 1013 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 IZUMO1Q8IYV9 350 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 LNX2Q8N448 690 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 DACT3Q96B18 629 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-209ENST00000547018 C3orf49Q96BT1 292 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 ZFP3Q96NJ6 502 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 HDHD2Q9H0R4 259 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 DDX28Q9NUL7 540 aaKnown RBP11.64□□□□□ -0.55
SCAF11-209ENST00000547018 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
SCAF11-209ENST00000547018 LOC400499M0QZD8 3231 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF264O43296 627 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 KLF4O43474 513 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 SIGLEC6O43699 453 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 HIST1H2ABP04908 130 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 SBK2P0C263 348 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 CLDN6P56747 220 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 SLC37A1P57057 533 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■■■□ 21.5
SCAF11-209ENST00000547018 BIKQ13323 160 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF362Q5T0B9 420 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ZNF613Q6PF04 617 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 CNIH2Q6PI25 160 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 HIST3H2AQ7L7L0 130 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 STT3BQ8TCJ2 826 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 GHSRQ92847 366 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 HIST1H2ACQ93077 130 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ARPC5LQ9BPX5 153 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 CMC2Q9NRP2 79 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 LANCL2Q9NS86 450 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ZFHX2Q9C0A1 2572 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-209ENST00000547018 LILRA5A6NI73 299 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 G3V3Y1 287 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 SLC25A12O75746 678 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 LYPD3O95274 346 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 TGM1P22735 817 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 CLDN12P56749 244 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 EFNB1P98172 346 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 FGFBP1Q14512 234 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 LYSMD4Q5XG99 296 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ZCCHC12Q6PEW1 402 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 JAZF1Q86VZ6 243 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 SAMD12Q8N8I0 201 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 GFM1Q96RP9 751 aaKnown RBP11.63□□□□□ -0.55
SCAF11-209ENST00000547018 WACQ9BTA9 647 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ANKRD19PQ9H560 264 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 FGF20Q9NP95 211 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-209ENST00000547018 ACOXLQ9NUZ1 547 aa11.63□□□□□ -0.55
SCAF11-209ENST00000547018 AK6Q9Y3D8 172 aaKnown RBP11.63□□□□□ -0.55
SCAF11-209ENST00000547018 TFPIP10646 304 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 EDNRAP25101 427 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SLC35D2Q76EJ3 337 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 KRT74Q7RTS7 529 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SLC29A4Q7RTT9 530 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 NANOGNBQ7Z5D8 188 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 RDH10Q8IZV5 341 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 THEM6Q8WUY1 208 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 LCORQ96JN0 433 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-209ENST00000547018 SLX1AQ9BQ83 275 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 GAREM1Q9H706 876 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TMEM5Q9Y2B1 443 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TMEM129A0AVI4 362 aa11.62□□□□□ -0.55
SCAF11-209ENST00000547018 TMEM72A0PK05 275 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms