RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 NUDT19A8MXV4 375 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 M0R3H8 397 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 PSMD9O00233 223 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 PRKNO60260 465 aaPredicted RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 FADS1O60427 444 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 GADD45GO95257 159 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 HPP00738 406 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 ADAP00813 363 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 THY1P04216 161 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 S100A9P06702 114 aaKnown RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 H1F0P07305 194 aaKnown RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 TNFRSF1BP20333 461 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 MYF6P23409 242 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 IL32P24001 234 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 HTR2AP28223 471 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 DAPP51397 102 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 ARHGDIAP52565 204 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 IST1P53990 364 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 DBPQ10586 325 aaPredicted RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 MERTKQ12866 999 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SKP2Q13309 424 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 EFR3AQ14156 821 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 GPR68Q15743 365 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 NTRK2Q16620 822 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 LRRC36Q1X8D7 754 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 MAJINQ3KP22 176 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 PDZK1Q5T2W1 519 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 C1orf94Q6P1W5 598 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 FAM199XQ6PEV8 388 aaPredicted RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 NDUFAF7Q7L592 441 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 OLIG3Q7RTU3 272 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 OVCH2Q7RTZ1 564 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 RANBP3LQ86VV4 465 aaPredicted RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 RBM45Q8IUH3 476 aaKnown RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 MISPQ8IVT2 679 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 NKAIN4Q8IVV8 208 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 CLIP4Q8N3C7 705 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 ZNF527Q8NB42 609 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 IL17RDQ8NFM7 739 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 OR5L2Q8NGL0 311 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SLC7A13Q8TCU3 470 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 CT55Q8WUE5 264 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 FAM168AQ92567 244 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 EFHD2Q96C19 240 aaPredicted RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 IP6K3Q96PC2 410 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 ADI1Q9BV57 179 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SCPEP1Q9HB40 452 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SH2D2AQ9NP31 389 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 KIF17Q9P2E2 1029 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 ENOPH1Q9UHY7 261 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 TNRC6AQ8NDV7 1962 aaKnown RBP7.69□□□□□ -1.18
VPS29-203ENST00000546588 J3KTA2 159 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 TNFRSF11BO00300 401 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 GNGT2O14610 69 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 CHP2O43745 196 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 EIF4E2O60573 245 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 ZNF354AO60765 605 aaPredicted RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 BCAS1O75363 584 aaPredicted RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 ZFAND5O76080 213 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 OPN1MWP04001 364 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 OPN1MW2P0DN77 364 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 OPN1MW3P0DN78 364 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ICAM2P13598 275 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 IGFBP5P24593 272 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 CAPGP40121 348 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 RBM34P42696 430 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 TMED10P49755 219 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 RAD23AP54725 363 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 GAS1P54826 345 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 CDH12P55289 794 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 SUMO3P55854 103 aaPredicted RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 CLDN6P56747 220 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 NRG3P56975 720 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 SOX8P57073 446 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 RGS8P57771 180 aaPredicted RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 FOXL2P58012 376 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 SPIBQ01892 262 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ST3GAL3Q11203 375 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 TARDBPQ13148 414 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS29-203ENST00000546588 MED21Q13503 144 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 DNASE1L3Q13609 305 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 KEAP1Q14145 624 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 EXOC3L2Q2M3D2 409 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 KRTCAP3Q53RY4 240 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 C3orf38Q5JPI3 329 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ENTPD8Q5MY95 495 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 RHOUQ7L0Q8 258 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ZNF550Q7Z398 422 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 RNF113BQ8IZP6 322 aaKnown RBP7.68□□□□□ -1.18
VPS29-203ENST00000546588 HS3ST5Q8IZT8 346 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 CLDN22Q8N7P3 220 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 POGLUT1Q8NBL1 392 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 OR10G2Q8NGC3 310 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 OR4C3Q8NH37 302 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ADAMTS16Q8TE57 1224 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 DOK4Q8TEW6 326 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 GIPC3Q8TF64 312 aa7.68□□□□□ -1.18
VPS29-203ENST00000546588 ACOT11Q8WXI4 607 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms