RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 HRGP04196 525 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 GPIP06744 558 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 C8BP07358 591 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 PPP3CBP16298 524 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 HTR2AP28223 471 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 IDUAP35475 653 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 OR2B6P58173 313 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 HOXC5Q00444 222 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 DMTNQ08495 405 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 EXOC3L2Q2M3D2 409 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 VMACQ2NL98 169 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 GLIPR1L2Q4G1C9 344 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 RABL3Q5HYI8 236 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 INTS11Q5TA45 600 aaKnown RBP10.54□□□□□ -0.72
YBX3-217ENST00000546164 FAM91A1Q658Y4 838 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 CCDC80Q76M96 950 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 SPATA21Q7Z572 469 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 GALNT5Q7Z7M9 940 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 STK35Q8TDR2 534 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 DNAJA4Q8WW22 397 aaPredicted RBP10.54□□□□□ -0.72
YBX3-217ENST00000546164 WFIKKN1Q96NZ8 548 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 ZNF300Q96RE9 604 aaPredicted RBP10.54□□□□□ -0.72
YBX3-217ENST00000546164 POLDIP3Q9BY77 421 aaKnown RBP10.54□□□□□ -0.72
YBX3-217ENST00000546164 GID8Q9NWU2 228 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 ARMCX1Q9P291 453 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 GPR52Q9Y2T5 361 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 A0A1B0GWA3 101 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 CASKO14936 926 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 SNX3O60493 162 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 FMO6PO60774 539 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 RAMP1O60894 148 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 LGI1O95970 557 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 PNMTP11086 282 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 FPR1P21462 350 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 CRYGSP22914 178 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 LSP1P33241 339 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 SEC24CP53992 1094 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 RGS8P57771 180 aaPredicted RBP10.53□□□□□ -0.72
YBX3-217ENST00000546164 VEZF1Q14119 521 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 P2RY6Q15077 328 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 NRF1Q16656 503 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 DUSP7Q16829 419 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 C1orf140Q5VVS0 124 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 ERICH5Q6P6B1 374 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 C5orf46Q6UWT4 87 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 Q6ZT83 130 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 CDH24Q86UP0 819 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 GPR32P1Q8NGA4 272 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 OR52E4Q8NGH9 312 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 ARHGDIGQ99819 225 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
YBX3-217ENST00000546164 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
YBX3-217ENST00000546164 ECSITQ9BQ95 431 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 NAA11Q9BSU3 229 aaPredicted RBP10.53□□□□□ -0.72
YBX3-217ENST00000546164 MED18Q9BUE0 208 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 SF3B5Q9BWJ5 86 aaKnown RBP10.53□□□□□ -0.72
YBX3-217ENST00000546164 HDHD5Q9BXW7 423 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 KLHL4Q9C0H6 718 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 PIF1Q9H611 641 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 RPS6KB2Q9UBS0 482 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 SLC13A4Q9UKG4 626 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 FREM1Q5H8C1 2179 aa10.53□□□□□ -0.72
YBX3-217ENST00000546164 A0A0B4J2E0 115 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 A0A1B0GX12 115 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 GMNCA6NCL1 334 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 AQP7P3A6NL99 342 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 DEFB108AA8MXU0 73 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 FTCDNL1E5RQL4 147 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 DYNC1I1O14576 645 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 TPST2O60704 377 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 AHSA1O95433 338 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 COX4I1P13073 169 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 CD247P20963 164 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 DRD4P21917 467 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 CRYBA2P53672 197 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 NCALDP61601 193 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 EGR4Q05215 589 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 BNIP2Q12982 314 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 CEACAM7Q14002 265 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 SLC17A1Q14916 467 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.73
YBX3-217ENST00000546164 ULK3Q6PHR2 472 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 C22orf34Q6ZV56 151 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 ARPINQ7Z6K5 226 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 CDC20BQ86Y33 519 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 CCDC103Q8IW40 242 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 SMYD1Q8NB12 490 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 STEAP2Q8NFT2 490 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 MFSD8Q8NHS3 518 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 RASSF5Q8WWW0 418 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 SLC38A4Q969I6 547 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 TAMM41Q96BW9 452 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 RCN3Q96D15 328 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 DNAJA3Q96EY1 480 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 ZNF583Q96ND8 569 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 WFDC6Q9BQY6 131 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 TAPBPLQ9BX59 468 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 NSRP1Q9H0G5 558 aaKnown RBP10.52□□□□□ -0.73
YBX3-217ENST00000546164 MYLK2Q9H1R3 596 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms