RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RPP30P78346 268 aaKnown RBP11.64□□□□□ -0.55
COL4A6-209ENST00000545689 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 PPP1R35Q8TAP8 253 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ASF1BQ9NVP2 202 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 PCDHGA6Q9Y5G7 932 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 TMEM129A0AVI4 362 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 GYPBP06028 91 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 HOXD12P35452 270 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 FOXK2Q01167 660 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 LYSMD4Q5XG99 296 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 CAMK2AQ9UQM7 478 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 VDAC3Q9Y277 283 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 TRBV11-1A0A0K0K1C0 115 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 A6NCN8 305 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 TNFRSF10CO14798 259 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 PVRP15151 417 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 UQCRC1P31930 480 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 SFTPDP35247 375 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ATP1B3P54709 279 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ABHD4Q8TB40 342 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 TEX37Q96LM6 180 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 CENPOQ9BU64 300 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ALG12Q9BV10 488 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 SLCO5A1Q9H2Y9 848 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 CCL26Q9Y258 94 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 H3BNC9 293 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 FBXO45P0C2W1 286 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 PRPH2P23942 346 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF77Q15935 545 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 RFLNAQ6ZTI6 216 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 FAM83FQ8NEG4 500 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-209ENST00000545689 NIPSNAP1Q9BPW8 284 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 PPT2Q9UMR5 302 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 LOC105369274A0A096LPK9 316 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 A0A1B0GVG6 124 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 HIDE1A8MVS5 230 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 F8W036 122 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SUSD5O60279 629 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SPDEFO95238 335 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 ISL1P61371 349 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 IL13RA1P78552 427 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 ARF1P84077 181 aaKnown RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 METRNLQ641Q3 311 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 OR4N4Q8N0Y3 316 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 FRMD1Q8N878 549 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 STK35Q8TDR2 534 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 FCRL1Q96LA6 429 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SLC22A12Q96S37 553 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 NIPAL2Q9H841 368 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 STEAP3Q658P3 488 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 MBOAT4Q96T53 435 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 RCE1Q9Y256 329 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SNX11Q9Y5W9 270 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 KNG1P01042 644 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 POLR2IP36954 125 aaKnown RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 BCL6P41182 706 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 VASNQ6EMK4 673 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 LAX1Q8IWV1 398 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 LILRB2Q8N423 598 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 PLEK2Q9NYT0 353 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 LRIT1Q9P2V4 623 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 PIGAP37287 484 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 AQP2P41181 271 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 APOOLQ6UXV4 268 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 VASH1Q7L8A9 365 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 OR5L1Q8NGL2 311 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 ISYNA1Q9NPH2 558 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF226Q9NYT6 803 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 NDRG4Q9ULP0 352 aaKnown RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 LSM5Q9Y4Y9 91 aaKnown RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 CORINQ9Y5Q5 1042 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 TCRBV5S2A0A599 114 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 F5H5K5 113 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 AQP9O43315 295 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 CTNSO60931 367 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 CXADRP78310 365 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 TBPL2Q6SJ96 375 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 LYPD4Q6UWN0 246 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 NRARPQ7Z6K4 114 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SULF2Q8IWU5 870 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 MRPL41Q8IXM3 137 aaKnown RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 OR56B1Q8NGI3 324 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 LCORQ96JN0 433 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-209ENST00000545689 HHIPQ96QV1 700 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 KATNB1Q9BVA0 655 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 ST6GALNAC5Q9BVH7 336 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SLC25A31Q9H0C2 315 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 EMC7Q9NPA0 242 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 SLX4Q8IY92 1834 aa11.63□□□□□ -0.55
COL4A6-209ENST00000545689 PSMB1P20618 241 aaKnown RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 TRHRP34981 398 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 ERVFC1P60507 584 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 NDUFAF7Q7L592 441 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 NXT1Q9UKK6 140 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms