RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CNOT9Q92600 299 aaKnown RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM19Q96HH6 336 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 LURAP1Q96LR2 239 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 OR5B2Q96R09 309 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 SLC39A3Q9BRY0 314 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM120AQ9BXJ8 343 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 BCL2L10Q9HD36 194 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 A4GALTQ9NPC4 353 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 SLC52A3Q9NQ40 469 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 FGFR1OP2Q9NVK5 253 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 ELOVL5Q9NYP7 299 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 VAPAQ9P0L0 249 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 CHRNA9Q9UGM1 479 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 NDRG3Q9UGV2 375 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 GMEB1Q9Y692 573 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 DSPPQ9NZW4 1301 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SULT2B1O00204 365 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 FAAHO00519 579 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CASKO14936 926 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SS18L1O75177 396 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 PRKD3O94806 890 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 TFPIP10646 304 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 POU2F1P14859 743 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 HOXB9P17482 250 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 GPX2P18283 190 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ENPP1P22413 925 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SLC6A2P23975 617 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SHC1P29353 583 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CPOXP36551 454 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CD79BP40259 229 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 MDH1P40925 334 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CLK1P49759 484 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 POLR2HP52434 150 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 MAP2K6P52564 334 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 GUCY1A3Q02108 690 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 EPS8Q12929 822 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SNTB1Q13884 538 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 MAPK11Q15759 364 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF239Q16600 458 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SYT14P1Q58G82 188 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF311Q5JNZ3 666 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 GCNT6Q5T4J0 391 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 RNF220Q5VTB9 566 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 REEP3Q6NUK4 255 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 TMPPEQ6ZT21 453 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 FCRLAQ7L513 359 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 DHDDSQ86SQ9 333 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 MTDHQ86UE4 582 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 STK32CQ86UX6 486 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 TMEM200AQ86VY9 491 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 VRK2Q86Y07 508 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 KRT73Q86Y46 540 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ZZZ3Q8IYH5 903 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 DPP10Q8N608 796 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CHAC2Q8WUX2 184 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ROBO4Q8WZ75 1007 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 DDIT4LQ96D03 193 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ZHX1-C8orf76Q96EF9 292 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF607Q96SK3 696 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 TACO1Q9BSH4 297 aaKnown RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SPATA5L1Q9BVQ7 753 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CCDC106Q9BWC9 280 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 OPN3Q9H1Y3 402 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CCDC134Q9H6E4 229 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CTPS2Q9NRF8 586 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 PLSCR4Q9NRQ2 329 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 GALNT8Q9NY28 637 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SLC25A37Q9NYZ2 338 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 SLAMF8Q9P0V8 285 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 CLEC4AQ9UMR7 237 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF443Q9Y2A4 671 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-224ENST00000544990 HDGFL3Q9Y3E1 203 aa6.58□□□□□ -1.36
CPSF7-224ENST00000544990 TRBV5-3A0A0A0MS03 114 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 TMED7-TICAM2A0A0A6YYA0 188 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CDHR4A6H8M9 788 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 A6NNC1 897 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF208O43345 1280 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 DNPH1O43598 174 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 BCAS1O75363 584 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-224ENST00000544990 SERPINB7O75635 380 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 GOSR1O95249 250 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 PGM3O95394 542 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CGAP01215 116 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 YES1P07947 543 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ETS2P15036 469 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CXCR1P25024 350 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 TACR3P29371 465 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ADSLP30566 484 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-224ENST00000544990 SLC1A3P43003 542 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 DIO1P49895 249 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CDK6Q00534 326 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 FAM27E3Q08E93 113 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 RBBP4Q09028 425 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 RASGEF1BQ0VAM2 473 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 NFYCQ13952 458 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CYLC2Q14093 348 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-224ENST00000544990 SCARB2Q14108 478 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 DAZAP2Q15038 168 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms