RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ALG12Q9BV10 488 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 NELFAQ9H3P2 528 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 MED16Q9Y2X0 877 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ASB1Q9Y576 335 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 PHIPQ8WWQ0 1821 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SOCS6O14544 535 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 ACOT8O14734 319 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 CAMLGP49069 296 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 DPY19L4Q7Z388 723 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SGPP2Q8IWX5 399 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 MAFIPQ8WZ33 124 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 KLHL13Q9P2N7 655 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 H7C2Y5 167 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 ARHGAP33O14559 1287 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 AKAIN1P0CW23 69 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 PKLRP30613 574 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 FAM71E1Q6IPT2 247 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 MBOAT2Q6ZWT7 520 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SPRED1Q7Z699 444 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 BOKQ9UMX3 212 aaPredicted RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 A0A1B0GTW7 788 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SNAPC5O75971 98 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 ELAVL4P26378 380 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 KCNAB1Q14722 419 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 LILRB2Q8N423 598 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 IL37Q9NZH6 218 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 PCDHGA1Q9Y5H4 931 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SLC5A10A0PJK1 596 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 METTL15A6NJ78 407 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 SF3A2Q15428 464 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 RBM45Q8IUH3 476 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 PARP16Q8N5Y8 322 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 FAM83FQ8NEG4 500 aaPredicted RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 UBE2FQ969M7 185 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 PAPOLGQ9BWT3 736 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 ACKR4Q9NPB9 350 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 PRDM9Q9NQV7 894 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 PPT2Q9UMR5 302 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 LAMA4Q16363 1823 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 TLCD2A6NGC4 264 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 ZNF749O43361 778 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 CSF1P09603 554 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 LTBQ06643 244 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 METTL11BQ5VVY1 283 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 NIPAL3Q6P499 406 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SLC16A14Q7RTX9 510 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 CCDC28AQ8IWP9 274 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SLC35F3Q8IY50 421 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 RNF113BQ8IZP6 322 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 SNIP1Q8TAD8 396 aaKnown RBP11.88□□□□□ -0.51
CHD4-211ENST00000544484 SLC41A2Q96JW4 573 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 ZDHHC5Q9C0B5 715 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 SPHK1Q9NYA1 384 aa11.88□□□□□ -0.51
CHD4-211ENST00000544484 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 ALDOBP05062 364 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 TFAP2AP05549 437 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 SERPINE2P07093 398 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 SNRPBP14678 240 aaKnown RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 HTR5AP47898 357 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 MRPL58Q14197 206 aaKnown RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 AFMIDQ63HM1 303 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 C3P1Q6ZMU1 363 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 GRAMD2AQ8IUY3 354 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 BRIX1Q8TDN6 353 aaKnown RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 ISL2Q96A47 359 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 KIR3DX1Q9H7L2 352 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 B3GNT2Q9NY97 397 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 F5H5P2 479 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 CDK4P11802 303 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 SLC1A3P43003 542 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 MARCH3Q86UD3 253 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 HAVCR2Q8TDQ0 301 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ZNF566Q969W8 418 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 TMED7-TICAM2A0A0A6YYA0 188 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 LRIT2A6NDA9 550 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 TMX2-CTNND1H3BSU7 103 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 PIP5K1CO60331 668 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 SLC35E2P0CK97 266 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 APEHP13798 732 aaKnown RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 CD46P15529 392 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 IL32P24001 234 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 TRMT12Q53H54 448 aaKnown RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 MFSD12Q6NUT3 480 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 TSSK4Q6SA08 328 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 GDF7Q7Z4P5 450 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 GTPBP8Q8N3Z3 284 aaPredicted RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 GCDHQ92947 438 aaPredicted RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 OBP2BQ9NPH6 170 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ZNF281Q9Y2X9 895 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms