RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZNF208O43345 1280 aa27.53■■■□□ 2
CCM2-219ENST00000544363 CBR3O75828 277 aa27.53■■■□□ 2
CCM2-219ENST00000544363 BGLAPP02818 100 aa27.53■■■□□ 2
CCM2-219ENST00000544363 DPP4P27487 766 aa27.53■■■□□ 2
CCM2-219ENST00000544363 ADH6P28332 368 aa27.53■■■□□ 2
CCM2-219ENST00000544363 EIF1P41567 113 aaKnown RBP27.53■■■□□ 2
CCM2-219ENST00000544363 CSNK2BP67870 215 aa27.53■■■□□ 2
CCM2-219ENST00000544363 EFNB1P98172 346 aa27.53■■■□□ 2
CCM2-219ENST00000544363 OR1C1Q15619 314 aa27.53■■■□□ 2
CCM2-219ENST00000544363 C1orf140Q5VVS0 124 aa27.53■■■□□ 2
CCM2-219ENST00000544363 PTDSS2Q9BVG9 487 aa27.53■■■□□ 2
CCM2-219ENST00000544363 FKRPQ9H9S5 495 aa27.53■■■□□ 2
CCM2-219ENST00000544363 DEPPQ9NTK1 212 aa27.53■■■□□ 2
CCM2-219ENST00000544363 ZNF229Q9UJW7 825 aa27.53■■■□□ 2
CCM2-219ENST00000544363 TLX3O43711 291 aaPredicted RBP27.52■■■□□ 2
CCM2-219ENST00000544363 XPNPEP2O43895 674 aa27.52■■■□□ 2
CCM2-219ENST00000544363 PRKYO43930 277 aa27.52■■■□□ 2
CCM2-219ENST00000544363 NDUFB2O95178 105 aa27.52■■■□□ 2
CCM2-219ENST00000544363 HMGN1P05114 100 aa27.52■■■□□ 2
CCM2-219ENST00000544363 ASAH2BP0C7U1 165 aa27.52■■■□□ 2
CCM2-219ENST00000544363 CDH15P55291 814 aa27.52■■■□□ 2
CCM2-219ENST00000544363 RPS4XP62701 263 aaKnown RBP27.52■■■□□ 2
CCM2-219ENST00000544363 APOFQ13790 326 aa27.52■■■□□ 2
CCM2-219ENST00000544363 IFT27Q9BW83 186 aa27.52■■■□□ 2
CCM2-219ENST00000544363 MRPS26Q9BYN8 205 aaKnown RBP27.52■■■□□ 2
CCM2-219ENST00000544363 OR11A1Q9GZK7 315 aa27.52■■■□□ 2
CCM2-219ENST00000544363 CLN6Q9NWW5 311 aa27.52■■■□□ 2
CCM2-219ENST00000544363 MSRB2Q9Y3D2 182 aa27.52■■■□□ 2
CCM2-219ENST00000544363 KLK10O43240 276 aa27.52■■■□□ 2
CCM2-219ENST00000544363 SLC6A6P31641 620 aa27.52■■■□□ 2
CCM2-219ENST00000544363 GABARAPL2P60520 117 aa27.52■■■□□ 2
CCM2-219ENST00000544363 FAM69AQ5T7M9 428 aa27.52■■■□□ 2
CCM2-219ENST00000544363 LNX2Q8N448 690 aa27.52■■■□□ 2
CCM2-219ENST00000544363 ZNF552Q9H707 407 aaPredicted RBP27.52■■■□□ 2
CCM2-219ENST00000544363 SERINC1Q9NRX5 453 aa27.52■■■□□ 2
CCM2-219ENST00000544363 SCN3BQ9NY72 215 aa27.52■■■□□ 2
CCM2-219ENST00000544363 EFSO43281 561 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 TLX2O43763 284 aaPredicted RBP27.51■■□□□ 1.99
CCM2-219ENST00000544363 EFNA2O43921 213 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 AHSA1O95433 338 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 MT-ATP6P00846 226 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 GRK5P34947 590 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 PRPS1P60891 318 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 MFAP5Q13361 173 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 ANKDD1AQ495B1 522 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 FAM26EQ8N5C1 309 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 DDIT4LQ96D03 193 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 PLCXD1Q9NUJ7 323 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 BAIAP2Q9UQB8 552 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 HIF3AQ9Y2N7 669 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 TPRKBQ9Y3C4 175 aa27.51■■□□□ 1.99
CCM2-219ENST00000544363 A0A087WXM4 84 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 SURF4O15260 269 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 FAM20BO75063 409 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 HK1P19367 917 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 TCEA1P23193 301 aaKnown RBP27.5■■□□□ 1.99
CCM2-219ENST00000544363 EEF1B2P24534 225 aaKnown RBP27.5■■□□□ 1.99
CCM2-219ENST00000544363 CCL11P51671 97 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 GPR85P60893 370 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 DEFB109BQ30KR1 87 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 TMEM201Q5SNT2 666 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 SLC25A30Q5SVS4 291 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 OR6S1Q8NH40 331 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 Q96MT0 163 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 RNF32Q9H0A6 362 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 TUBA8Q9NY65 449 aaPredicted RBP27.5■■□□□ 1.99
CCM2-219ENST00000544363 DKKL1Q9UK85 242 aa27.5■■□□□ 1.99
CCM2-219ENST00000544363 SH3D21A4FU49 640 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 OR5H15A6NDH6 313 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 OR2T1O43869 369 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 HIST1H2ABP04908 130 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 ATP6V1B1P15313 513 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 IL11P20809 199 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 FOXK1P85037 733 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 HIST3H2AQ7L7L0 130 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 GTPBP8Q8N3Z3 284 aaPredicted RBP27.49■■□□□ 1.99
CCM2-219ENST00000544363 OR5M1Q8NGP8 315 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 TMEM163Q8TC26 289 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 HIST1H2ACQ93077 130 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 SPIN1Q9Y657 262 aaPredicted RBP27.49■■□□□ 1.99
CCM2-219ENST00000544363 LRRC3CA6NJW4 275 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 ZIC3O60481 467 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 OCLNQ16625 522 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.49■■□□□ 1.99
CCM2-219ENST00000544363 GXYLT1Q4G148 440 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 MAMDC2Q7Z304 686 aaPredicted RBP27.49■■□□□ 1.99
CCM2-219ENST00000544363 SNIP1Q8TAD8 396 aaKnown RBP27.49■■□□□ 1.99
CCM2-219ENST00000544363 PLEKHA8Q96JA3 519 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 FAM173AQ9BQD7 235 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 POTEKPQ9BYX7 375 aa27.49■■□□□ 1.99
CCM2-219ENST00000544363 PTGES3LE9PB15 166 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 BLOC1S5-TXNDC5H3BN57 136 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 PPP1R3DO95685 299 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 CLPTM1O96005 669 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 TSPAN19P0C672 248 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 MLLT10P55197 1068 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 TUBA4AP68366 448 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 C3orf33Q6P1S2 294 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 DPY19L2P2Q6ZN68 376 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 NANOGNBQ7Z5D8 188 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms