RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 FXNQ16595 210 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 SLC6A19Q695T7 634 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 ESPNLQ6ZVH7 1005 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 SLC35F3Q8IY50 421 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 HAPLN2Q9GZV7 340 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 METTL9Q9H1A3 318 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 MCTS1Q9ULC4 181 aaKnown RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 CBLCQ9ULV8 474 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 C17orf112F2Z3M2 114 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 ABOP16442 354 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 PKLRP30613 574 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 RAP2BP61225 183 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 MFGE8Q08431 387 aaPredicted RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 RBMS2Q15434 407 aaKnown RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 C1orf220Q5T0J3 134 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 AVPI1Q5T686 147 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 TANKQ92844 425 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 INTS12Q96CB8 462 aaKnown RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 HHIPQ96QV1 700 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 C16orf70Q9BSU1 422 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 VN1R3Q9BXE9 311 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 OR11A1Q9GZK7 315 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 LINC00597Q9H2U6 94 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 DZANK1Q9NVP4 752 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 CNOT2Q9NZN8 540 aaKnown RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 A0A0J9YY10 115 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 METTL15A6NJ78 407 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 DVL1O14640 695 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 SIX6O95475 246 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 CPOXP36551 454 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 DVL1P1P54792 670 aaPredicted RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 MSMO1Q15800 293 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 LGALS14Q8TCE9 139 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 ANKRD9Q96BM1 317 aaPredicted RBP14.42□□□□□ -0.1
CHD4-210ENST00000544040 SLC35A3Q9Y2D2 325 aa14.42□□□□□ -0.1
CHD4-210ENST00000544040 OR7C1O76099 320 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 BCKDHBP21953 392 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 ZP2Q05996 745 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 IKZF1Q13422 519 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 FAM199XQ6PEV8 388 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 PLPP5Q8NEB5 264 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 VRTNQ9H8Y1 702 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 FAM212BQ9NTI7 297 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 C1orf123Q9NWV4 160 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 PIAS3Q9Y6X2 628 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 SLC9B1P1A6NJY1 282 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 ZNF593O00488 134 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 PVRP15151 417 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 HOXD11P31277 338 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 Q6ZSR6 202 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 OR6T1Q8NGN1 323 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 UPRTQ96BW1 309 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 NT5DC2Q9H857 520 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 CLDN1O95832 211 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 IL1AP01583 271 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 CCR6P51684 374 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 PXT1Q8NFP0 134 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 FIBINQ8TAL6 211 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 MUL1Q969V5 352 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 GPR45Q9Y5Y3 372 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 TCRBV3S1A0A5B6 114 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 ARHGAP33O14559 1287 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 UGDHO60701 494 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 SLC10A3P09131 477 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 MPEG1Q2M385 716 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 TMEM71Q6P5X7 295 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 APOOQ9BUR5 198 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 SLC39A9Q9NUM3 307 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 ATP6V1G2-DDX39BF2Z307 99 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 M0QYG6 137 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 OR13C7P0DN81 318 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 TAGLN2P37802 199 aaKnown RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 ADIRFQ15847 76 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 CLVS2Q5SYC1 327 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 HACD4Q5VWC8 232 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 TBPL2Q6SJ96 375 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 SMAP2Q8WU79 429 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 EGLN2Q96KS0 407 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 SMIM14Q96QK8 99 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 PARP12Q9H0J9 701 aaKnown RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 SLC6A20Q9NP91 592 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 THBS3P49746 956 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 TLE4Q04727 773 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 CAMK2DQ13557 499 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 CPEB2Q7Z5Q1 589 aaKnown RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 KIAA0907Q7Z7F0 614 aaPredicted RBP14.41□□□□□ -0.1
CHD4-210ENST00000544040 TMEFF1Q8IYR6 380 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 SHISA4Q96DD7 197 aa14.41□□□□□ -0.1
CHD4-210ENST00000544040 NFAT5O94916 1531 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 HSD17B6O14756 317 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 KCNK2O95069 426 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 IGHG1P01857 330 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 HBQ1P09105 142 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 HTR5AP47898 357 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 WNT7BP56706 349 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 OR10K2Q6IF99 312 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 PIANPQ8IYJ0 282 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 PISDQ9UG56 409 aa14.4□□□□□ -0.1
CHD4-210ENST00000544040 RAB19A4D1S5 217 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms