RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 OPN1LWP04000 364 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 ABOP16442 354 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 EIF1AXP47813 144 aaKnown RBP10.71□□□□□ -0.69
DDB1-223ENST00000543658 LIMS1P48059 325 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 STARP49675 285 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 OR2B6P58173 313 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 IL1RL1Q01638 556 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 PRKCDQ05655 676 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 OR7A5Q15622 319 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 HBMQ6B0K9 141 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 TBPL2Q6SJ96 375 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 MAMDC2Q7Z304 686 aaPredicted RBP10.71□□□□□ -0.69
DDB1-223ENST00000543658 AQP11Q8NBQ7 271 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 OR2V1Q8NHB1 315 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 DNAJC9Q8WXX5 260 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 SLC25A36Q96CQ1 311 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 BPIFA2Q96DR5 249 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 KTI12Q96EK9 354 aaPredicted RBP10.71□□□□□ -0.69
DDB1-223ENST00000543658 FAM46AQ96IP4 442 aaKnown RBP10.71□□□□□ -0.69
DDB1-223ENST00000543658 CIB1Q99828 191 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 ZNF426Q9BUY5 554 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 NANSQ9NR45 359 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 PAQR5Q9NXK6 330 aaPredicted RBP10.71□□□□□ -0.69
DDB1-223ENST00000543658 IGKV1D-42A0A075B6H8 117 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 A0A1B0GVC2 190 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 EIF4E1BA6NMX2 242 aaKnown RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 EFCAB9A8MZ26 197 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 NPIPA2E9PIF3 369 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 NPIPA3F8WFD2 350 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 OR7A10O76100 309 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 SYNGR4O95473 234 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 PMS2P2O95744 297 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ADAP00813 363 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 POU2F1P14859 743 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ZNF708P17019 499 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 CDH2P19022 906 aaPredicted RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 GSTM3P21266 225 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 CBLP22681 906 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 GPR4P46093 362 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 LHX2P50458 406 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 CTBP2P56545 445 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 SLC35A1P78382 337 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 EGR4Q05215 589 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 MYBPHQ13203 477 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 SF3B4Q15427 424 aaKnown RBP eCLIP10.7□□□□□ -0.72e-7■■■□□ 17.8
DDB1-223ENST00000543658 SEC23BQ15437 767 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 BCL2A1Q16548 175 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 VASNQ6EMK4 673 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 PGBD2Q6P3X8 592 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 PCSK4Q6UW60 755 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 GFRALQ6UXV0 394 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ZBTB49Q6ZSB9 765 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 PRICKLE2Q7Z3G6 844 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 NANOGNBQ7Z5D8 188 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 TMEM179BQ7Z7N9 219 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 OR6S1Q8NH40 331 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 MFSD8Q8NHS3 518 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 CPT1CQ8TCG5 803 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ARL5BQ96KC2 179 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 RBM4BQ9BQ04 359 aaKnown RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 NAA11Q9BSU3 229 aaPredicted RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 FUZQ9BT04 418 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 OSBPL10Q9BXB5 764 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 PRRG4Q9BZD6 226 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 GABARAPL1Q9H0R8 117 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 FKRPQ9H9S5 495 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 NTN4Q9HB63 628 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 MEPEQ9NQ76 525 aaPredicted RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 C8orf4Q9NR00 106 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ASF1BQ9NVP2 202 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ALKBH4Q9NXW9 302 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 SPRR3Q9UBC9 169 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ENOPH1Q9UHY7 261 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 MCTS1Q9ULC4 181 aaKnown RBP10.7□□□□□ -0.7
DDB1-223ENST00000543658 CORINQ9Y5Q5 1042 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 ZGRF1Q86YA3 2104 aa10.7□□□□□ -0.7
DDB1-223ENST00000543658 A0A0J9YW62 118 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 UNC119BA6NIH7 251 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 PDLIM1O00151 329 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 EFNA2O43921 213 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 EIF1BO60739 113 aaKnown RBP10.69□□□□□ -0.7
DDB1-223ENST00000543658 NPIPB7O75200 414 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 OR6A2O95222 327 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 WISP1O95388 367 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 TPOP07202 933 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 FUT1P19526 365 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 FUT4P22083 530 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 IGFBP5P24593 272 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 SHC1P29353 583 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 PTGS2P35354 604 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 SLC9A3P48764 834 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 DIO1P49895 249 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 CLDN15P56746 228 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 CLDN18P56856 261 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 CLDN20P56880 219 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 CARD18P57730 90 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 HSF1Q00613 529 aa10.69□□□□□ -0.7
DDB1-223ENST00000543658 SNCBQ16143 134 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms