RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 UBQLN3Q9H347 655 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 SLC2A4RGQ9NR83 387 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 LAMB2P55268 1798 aa18.02■□□□□ 0.47
SUDS3-204ENST00000543473 SLC26A5P58743 744 aa18.02■□□□□ 0.47
SUDS3-204ENST00000543473 EIF2B1Q14232 305 aaKnown RBP18.02■□□□□ 0.47
SUDS3-204ENST00000543473 ALKBH2Q6NS38 261 aa18.02■□□□□ 0.47
SUDS3-204ENST00000543473 AVL9Q8NBF6 648 aa18.02■□□□□ 0.47
SUDS3-204ENST00000543473 SULT4A1Q9BR01 284 aa18.02■□□□□ 0.47
SUDS3-204ENST00000543473 NOX4Q9NPH5 578 aa18.02■□□□□ 0.47
SUDS3-204ENST00000543473 RREB1Q92766 1687 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 M0R082 166 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 RAB3AP20336 220 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 ARRB1P49407 418 aaPredicted RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 NKX6-1P78426 367 aaPredicted RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 PYCR3Q53H96 274 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 PARS2Q7L3T8 475 aaKnown RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 PNPLA2Q96AD5 504 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 ZFYVE21Q9BQ24 234 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 GDE1Q9NZC3 331 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 UBE2J1Q9Y385 318 aaPredicted RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 TSPAN11A1L157 253 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 PRR35P0CG20 571 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 TTLL10Q6ZVT0 673 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 HMGCLL1Q8TB92 370 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 PDXPQ96GD0 296 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 SLC22A12Q96S37 553 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 A8MVJ9 347 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 PRDX1Q06830 199 aaKnown RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 EXOSC2Q13868 293 aaKnown RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 ARL6IP1Q15041 203 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 CCSMST1Q4G0I0 132 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 RAB11FIP2Q7L804 512 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 WDR77Q9BQA1 342 aaPredicted RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 FZD3Q9NPG1 666 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 LDB3O75112 727 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 AIFM1O95831 613 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 GABRB1P18505 474 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 FOXK2Q01167 660 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 SGPP2Q8IWX5 399 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 ZNF709Q8N972 641 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 STK35Q8TDR2 534 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 OR2A14Q96R47 310 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 CDK5RAP2Q96SN8 1893 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 CDCA3Q99618 268 aaPredicted RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 SYT3Q9BQG1 590 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 CWH43Q9H720 699 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 TESQ9UGI8 421 aaKnown RBP18.01■□□□□ 0.47
SUDS3-204ENST00000543473 HHLA2Q9UM44 414 aa18.01■□□□□ 0.47
SUDS3-204ENST00000543473 HLA-FP30511 346 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 PGAP1Q75T13 922 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TOMM40LQ969M1 308 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TNFRSF13CQ96RJ3 184 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 GLIPR2Q9H4G4 154 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 CAV2P51636 162 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 PPA1Q15181 289 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 GAREM2Q75VX8 874 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TMEM255BQ8WV15 326 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TM4SF18Q96CE8 201 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 LRRC46Q96FV0 321 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 GPR174Q9BXC1 333 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 PTGES2Q9H7Z7 377 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 KCNJ13O60928 360 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 FBXO24O75426 580 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 C5AR1P21730 350 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 GLCCI1Q86VQ1 547 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 ZNF679Q8IYX0 411 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 FNDC9Q8TBE3 224 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 GMEB2Q9UKD1 530 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 SLC6A14Q9UN76 642 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TEAD1P28347 426 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 GPR157Q5UAW9 335 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 CARD17Q5XLA6 110 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TMUB2Q71RG4 321 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 HHATLQ9HCP6 504 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 KCMF1Q9P0J7 381 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 TRAPPC4Q9Y296 219 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 ZNF337Q9Y3M9 751 aa18■□□□□ 0.47
SUDS3-204ENST00000543473 OR6C65A6NJZ3 312 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 IFNA1P01562 189 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 POU3F4P49335 361 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 FABP5Q01469 135 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 EXOSC7Q15024 291 aaKnown RBP17.99■□□□□ 0.47
SUDS3-204ENST00000543473 FAM122BQ7Z309 247 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 TMEM106AQ96A25 262 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 MYADMQ96S97 322 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 SMIM3Q9BZL3 60 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 SPATA6Q9NWH7 488 aaPredicted RBP17.99■□□□□ 0.47
SUDS3-204ENST00000543473 COL5A3P25940 1745 aaPredicted RBP17.99■□□□□ 0.47
SUDS3-204ENST00000543473 OIP5O43482 229 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 MED6O75586 246 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 CRTAPO75718 401 aaPredicted RBP17.99■□□□□ 0.47
SUDS3-204ENST00000543473 IGLV3-25P01717 112 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 NPPBP16860 134 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 ALDH3B1P43353 468 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 AVPI1Q5T686 147 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 HEPHL1Q6MZM0 1159 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 LILRA3Q8N6C8 439 aaPredicted RBP17.99■□□□□ 0.47
SUDS3-204ENST00000543473 ST6GALNAC5Q9BVH7 336 aa17.99■□□□□ 0.47
SUDS3-204ENST00000543473 MS4A8Q9BY19 250 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms