RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 COQ10AQ96MF6 247 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SORT1Q99523 831 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 FOLH1BQ9HBA9 442 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 UFSP2Q9NUQ7 469 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ARMC1Q9NVT9 282 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 NOSIPQ9Y314 301 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF175Q9Y473 711 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ASXL3Q9C0F0 2248 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 MEGF11A6BM72 1044 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 OR14I1A6ND48 311 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC35A1P78382 337 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 MAP4K2Q12851 820 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 OR1Q1Q15612 314 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF423Q2M1K9 1284 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 BEX5Q5H9J7 111 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC16A14Q7RTX9 510 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TSPYL5Q86VY4 417 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PDSS2Q86YH6 399 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 HAVCR2Q8TDQ0 301 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 INTS14Q96SY0 518 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZPBPQ9BS86 351 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 DPAGT1Q9H3H5 408 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PDFQ9HBH1 243 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PTTG2Q9NZH5 202 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF221Q9UK13 617 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 EMCNQ9ULC0 261 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM184BQ9Y519 407 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 DPPA5A6NC42 116 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SERINC4A6NH21 518 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF850A8MQ14 1090 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 LRRN3E7EW58 273 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CSO75390 466 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 MAS1P04201 325 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 STSP08842 583 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ST6GAL1P15907 406 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 DNASE1P24855 282 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TACR1P25103 407 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ELK4P28324 431 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SSTR4P31391 388 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 MAGEA2P43356 314 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 POLR2HP52434 150 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ARL6IP1Q15041 203 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ENTPD8Q5MY95 495 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM69Q5SWH9 247 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC48A1Q6P1K1 146 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM122CQ6P4D5 195 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PIWIL3Q7Z3Z3 882 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 KMT5CQ86Y97 462 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 INO80EQ8NBZ0 244 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 OR5AK2Q8NH90 309 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 STT3BQ8TCJ2 826 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 NUDT22Q9BRQ3 303 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC6A5Q9Y345 797 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 IGHV3-20A0A0C4DH32 117 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM221A6NGB7 291 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 C19orf67A6NJJ6 358 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZSCAN5BA6NJL1 495 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 M0R296 226 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SUSD5O60279 629 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 RBBP9O75884 186 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PPP3CBP16298 524 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 RAB4AP20338 218 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TACR3P29371 465 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 DNASE1L3Q13609 305 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 LTB4RQ15722 352 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF791Q3KP31 576 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF404Q494X3 552 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PIGGQ5H8A4 983 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC25A25Q6KCM7 469 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF613Q6PF04 617 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM46BQ96A09 425 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 LYRM4Q9HD34 91 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 NKX1-2Q9UD57 310 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF223Q9UK11 482 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ATG4BQ9Y4P1 393 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CSNK1G3Q9Y6M4 447 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 DOCK1Q14185 1865 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 DLGAP1O14490 977 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 OR7A17O14581 309 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 FANCGO15287 622 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 B4GAT1O43505 415 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 EIF1BO60739 113 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 UTS2O95399 124 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 AMY2BP19961 511 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 MFAP4P55083 255 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 S100A10P60903 97 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SIGLEC14Q08ET2 396 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 NKPD1Q17RQ9 610 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM71Q6P5X7 295 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ERASQ7Z444 233 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 NPRL2Q8WTW4 380 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF707Q96C28 371 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CCDC120Q96HB5 630 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CCDC115Q96NT0 180 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PAPOLGQ9BWT3 736 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PKIBQ9C010 78 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 PCDHGA7Q9Y5G6 932 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SNX11Q9Y5W9 270 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms