RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TRGV5	A0A0B4J1U4	118 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	LOC100130705	A0A1B0GUX0	176 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	C2orf92	A0A1B0GVN3	265 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	ATP6AP2	A0A1C7CYW4	349 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CCDC154	A6NI56	674 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NPIPA2	E9PIF3	369 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	LOC110117498-PIK3R3	F6TDL0	507 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NPIPA3	F8WFD2	350 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	LINC01387	J3KSC0	135 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	MANBA	O00462	879 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	UBFD1	O14562	309 aa	Known RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	OR10H2	O60403	315 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	TPST1	O60507	370 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	PPM1B	O75688	479 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	ATP6AP2	O75787	350 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CCNK	O75909	580 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	OR4F21	O95013	312 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	INMT	O95050	263 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	LRAT	O95237	230 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CRYZL1	O95825	349 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	IFI6	P09912	130 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	GABRA1	P14867	456 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	PAX1	P15863	534 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	TSPAN8	P19075	237 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	EFNA1	P20827	205 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	TGFBR2	P37173	567 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NR4A2	P43354	598 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	MAN2A2	P49641	1150 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	HTR6	P50406	440 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	XK	P51811	444 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	MAPK12	P53778	367 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CDH13	P55290	713 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	P2RX3	P56373	397 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	FBXW4	P57775	412 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	COPZ1	P61923	177 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CSNK2B	P67870	215 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SLC35A2	P78381	396 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	COL10A1	Q03692	680 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	EMX1	Q04741	257 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CHRNB3	Q05901	458 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	RIPPLY1	Q0D2K3	151 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	PMPCA	Q10713	525 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	LCP2	Q13094	533 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NFYC	Q13952	458 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SLC10A1	Q14973	349 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	POU4F3	Q15319	338 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	LTB4R	Q15722	352 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	ACSF3	Q4G176	576 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF628	Q5EBL2	1059 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	DCST1	Q5T197	706 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	C1orf185	Q5T7R7	199 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	UBE2U	Q5VVX9	321 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	RSBN1	Q5VWQ0	802 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	STEAP3	Q658P3	488 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	VASN	Q6EMK4	673 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	FAM111B	Q6SJ93	734 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	TMEM64	Q6YI46	380 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	RNF165	Q6ZSG1	346 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	MILR1	Q7Z6M3	343 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	ZDHHC13	Q8IUH4	622 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	TAGAP	Q8N103	731 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CLEC4F	Q8N1N0	589 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CLIP4	Q8N3C7	705 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	C1orf52	Q8N6N3	182 aa	Known RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	POC5	Q8NA72	575 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NAXE	Q8NCW5	288 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	OR5M9	Q8NGP3	310 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	OR5K1	Q8NHB7	308 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	MCFD2	Q8NI22	146 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NDNF	Q8TB73	568 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SUN5	Q8TC36	379 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	DOK4	Q8TEW6	326 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	PIK3R3	Q92569	461 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	HOXB13	Q92826	284 aa	Predicted RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SARAF	Q96BY9	339 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SLC35A4	Q96G79	324 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	EGLN2	Q96KS0	407 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	VSTM2L	Q96N03	204 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	UCN2	Q96RP3	112 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	GAL3ST4	Q96RP7	486 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	DHRS9	Q9BPW9	319 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SLC39A3	Q9BRY0	314 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CCDC32	Q9BV29	185 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	DGCR6L	Q9BY27	220 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	ITPA	Q9BY32	194 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SLC6A15	Q9H2J7	730 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	C12orf10	Q9HB07	376 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	TNFRSF12A	Q9NP84	129 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	EHD3	Q9NZN3	535 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	MKLN1	Q9UL63	735 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	SNX6	Q9UNH7	406 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	EXO1	Q9UQ84	846 aa	Known RBP	5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CCL27	Q9Y4X3	112 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	N6AMT1	Q9Y5N5	214 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	CAD	P27708	2225 aa		5.79	□□□□□ -1.48
CIT-213	ENST00000543324	NUP214	P35658	2090 aa	Predicted RBP	5.78	□□□□□ -1.48
CIT-213	ENST00000543324	PNMA8C	A0A1B0GUJ8	204 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms