RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 GADD45GO95257 159 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 CST1P01037 141 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 FUT4P22083 530 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 RRM2P31350 389 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 CA7P43166 264 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 SPIBQ01892 262 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 OR2T5Q6IEZ7 315 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 LSRQ86X29 649 aaPredicted RBP15.36■□□□□ 0.05
LIG1-204ENST00000542460 P3H2Q8IVL5 708 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 RNF113BQ8IZP6 322 aaKnown RBP15.36■□□□□ 0.05
LIG1-204ENST00000542460 OR2T29Q8NH02 315 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 ACOT11Q8WXI4 607 aaPredicted RBP15.36■□□□□ 0.05
LIG1-204ENST00000542460 CPNE4Q96A23 557 aaPredicted RBP15.36■□□□□ 0.05
LIG1-204ENST00000542460 ZNF845Q96IR2 970 aaPredicted RBP15.36■□□□□ 0.05
LIG1-204ENST00000542460 UCN2Q96RP3 112 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 TAPBPLQ9BX59 468 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 KLHL4Q9C0H6 718 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 CALHM2Q9HA72 323 aa15.36■□□□□ 0.05
LIG1-204ENST00000542460 LIPT2A6NK58 231 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 DNPH1O43598 174 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 IMPDH2P12268 514 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 PTNP21246 168 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 RPS5P46782 204 aaKnown RBP15.35■□□□□ 0.05
LIG1-204ENST00000542460 HMGA2P52926 109 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 SLC35A1P78382 337 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 EIF2S3LQ2VIR3 472 aaKnown RBP15.35■□□□□ 0.05
LIG1-204ENST00000542460 ACSF3Q4G176 576 aaPredicted RBP15.35■□□□□ 0.05
LIG1-204ENST00000542460 FGD3Q5JSP0 725 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 FAM69AQ5T7M9 428 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 C1orf185Q5T7R7 199 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 OR6S1Q8NH40 331 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 OR52J3Q8NH60 311 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 MFSD8Q8NHS3 518 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 SLC7A13Q8TCU3 470 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 TAAR8Q969N4 342 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 DNAJA3Q96EY1 480 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 TRIB1Q96RU8 372 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 PTDSS2Q9BVG9 487 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 SH3BGRL2Q9UJC5 107 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 MCTS1Q9ULC4 181 aaKnown RBP15.35■□□□□ 0.05
LIG1-204ENST00000542460 MED31Q9Y3C7 131 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 ZNF175Q9Y473 711 aa15.35■□□□□ 0.05
LIG1-204ENST00000542460 A0A087WUU8 490 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 HTR3EA5X5Y0 456 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 CD8B2A6NJW9 211 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 HNRNPRO43390 633 aaKnown RBP15.34■□□□□ 0.05
LIG1-204ENST00000542460 EIF1BO60739 113 aaKnown RBP15.34■□□□□ 0.05
LIG1-204ENST00000542460 SYNGR4O95473 234 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 IGF2P01344 180 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 UQCRFS1P47985 274 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 UGT2B15P54855 530 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 OR2B6P58173 313 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 PON3Q15166 354 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 NSUN5P2Q63ZY6 315 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 RTL6Q6ICC9 239 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 PODNL1Q6PEZ8 512 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 B3GNT6Q6ZMB0 384 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 C3P1Q6ZMU1 363 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 ZNF730Q6ZMV8 503 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 RRM2BQ7LG56 351 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 PRR7Q8TB68 274 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 ZHX1-C8orf76Q96EF9 292 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 SRXN1Q9BYN0 137 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 REEP1Q9H902 201 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 MEPEQ9NQ76 525 aaPredicted RBP15.34■□□□□ 0.05
LIG1-204ENST00000542460 FAM215AQ9Y5M1 114 aa15.34■□□□□ 0.05
LIG1-204ENST00000542460 TRBV4-1A0A0J9YWV2 114 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 SLC22A20A6NK97 555 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 FTCDNL1E5RQL4 147 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 E9PLN8 166 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 TNFRSF11BO00300 401 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 KPNA4O00629 521 aaPredicted RBP15.33■□□□□ 0.05
LIG1-204ENST00000542460 GNGT2O14610 69 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 ENTPD5O75356 428 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 FPR1P21462 350 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 ENPP1P22413 925 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 AGFG1P52594 562 aaKnown RBP15.33■□□□□ 0.05
LIG1-204ENST00000542460 MFSD13AQ14CX5 517 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 OR7A5Q15622 319 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 ZNF239Q16600 458 aaKnown RBP15.33■□□□□ 0.05
LIG1-204ENST00000542460 ZFP1Q6P2D0 407 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 RPTNQ6XPR3 784 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 MBOAT2Q6ZWT7 520 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 PFN4Q8NHR9 129 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 PYDC1Q8WXC3 89 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 WNT2BQ93097 391 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 SLC25A36Q96CQ1 311 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 ALPK1Q96QP1 1244 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 VKORC1Q9BQB6 163 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 FUZQ9BT04 418 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 PRRG4Q9BZD6 226 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 CLCF1Q9UBD9 225 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 DNAJB9Q9UBS3 223 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 TMCC3Q9ULS5 477 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 LYVE1Q9Y5Y7 322 aa15.33■□□□□ 0.05
LIG1-204ENST00000542460 A0A1B0GUH1 482 aa15.33■□□□□ 0.04
LIG1-204ENST00000542460 CLOCKO15516 846 aa15.33■□□□□ 0.04
LIG1-204ENST00000542460 TIPRLO75663 272 aa15.33■□□□□ 0.04
LIG1-204ENST00000542460 MT-ATP6P00846 226 aa15.33■□□□□ 0.04
LIG1-204ENST00000542460 FCGR2AP12318 317 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms