RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
DDX55-209ENST00000542286 C4orf36Q96KX1 117 aa13.59□□□□□ -0.23
DDX55-209ENST00000542286 TEAD3Q99594 435 aa13.59□□□□□ -0.23
DDX55-209ENST00000542286 GSDMCQ9BYG8 508 aa13.59□□□□□ -0.23
DDX55-209ENST00000542286 PPP1R3EQ9H7J1 279 aa13.59□□□□□ -0.23
DDX55-209ENST00000542286 ZMIZ1Q9ULJ6 1067 aa13.59□□□□□ -0.23
DDX55-209ENST00000542286 J3QRE1 110 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 GTPBP1O00178 669 aaKnown RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 BET1O15155 118 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 FOXS1O43638 330 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 AGR2O95994 175 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 GLULP15104 373 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 ACAA2P42765 397 aaKnown RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 MAGEB1P43366 347 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 GALEQ14376 348 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 TP53I3Q53FA7 332 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 ARMC6Q6NXE6 501 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 COMMD7Q86VX2 200 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 OOSP2Q86WS3 158 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 ASB12Q8WXK4 309 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 ZNF524Q96C55 264 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 SLC7A5P2Q9GIP4 190 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 DNAJB12Q9NXW2 375 aaKnown RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 PCDHGB7Q9Y5F8 929 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 CELSR3Q9NYQ7 3312 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 TRDV1A0A1B0GX56 115 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 A0A1W2PRG6 482 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 PRR23D1E9PI22 279 aaPredicted RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 PRAMEF26H0Y7S4 382 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 RNF13O43567 381 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 PRR23D2P0DMB1 279 aaPredicted RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 PRKACAP17612 351 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 MAP3K8P41279 467 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 RABIFP47224 123 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 SAMD14Q8IZD0 417 aaPredicted RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 OR52E2Q8NGJ4 325 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 BRIX1Q8TDN6 353 aaKnown RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 RBM18Q96H35 190 aaKnown RBP13.58□□□□□ -0.24
DDX55-209ENST00000542286 TEX12Q9BXU0 123 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 KLHL1Q9NR64 748 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
DDX55-209ENST00000542286 H3BSH0 61 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 IFNA16P05015 189 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 HMGN1P05114 100 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 IGFBP4P22692 258 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 INPP1P49441 399 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 YPEL5P62699 121 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 FHL1Q13642 323 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
DDX55-209ENST00000542286 CD200R1LQ6Q8B3 271 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 TMEM151BQ8IW70 566 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 PRSS58Q8IYP2 241 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 C19orf47Q8N9M1 422 aaKnown RBP13.57□□□□□ -0.24
DDX55-209ENST00000542286 SMRP1Q8NCR6 262 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 OR5M3Q8NGP4 307 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.57□□□□□ -0.24
DDX55-209ENST00000542286 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
DDX55-209ENST00000542286 ERMAPQ96PL5 475 aaPredicted RBP13.57□□□□□ -0.24
DDX55-209ENST00000542286 TMEM27Q9HBJ8 222 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 MCCC2Q9HCC0 563 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 A0A1B0GX12 115 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 MCIDASD6RGH6 385 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 OIP5O43482 229 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 RAF1P04049 648 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 WNT1P04628 370 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 ICAM2P13598 275 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 RAB38P57729 211 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 FCN2Q15485 313 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 AANATQ16613 207 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 GARNL3Q5VVW2 1013 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 MTFR2Q6P444 385 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 LNX2Q8N448 690 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 AP3S1Q92572 193 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 TGM7Q96PF1 710 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 FBRSQ9HAH7 460 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 LIN7BQ9HAP6 207 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 BABAM2Q9NXR7 383 aa13.57□□□□□ -0.24
DDX55-209ENST00000542286 A0A087WV62 115 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 CDC14CA4D256 554 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 IDSB3KWA1 339 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 LANCL1O43813 399 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 MTRF1O75570 445 aaKnown RBP13.56□□□□□ -0.24
DDX55-209ENST00000542286 SOX30O94993 753 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 NKX2-2O95096 273 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 HLA-DPB1P04440 258 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
DDX55-209ENST00000542286 ELK1P19419 428 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 PYCR1P32322 319 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 CCR4P51679 360 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 ZNF85Q03923 595 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 GAS6Q14393 721 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 OR5W2Q8NH69 310 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 TWSG1Q9GZX9 223 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 SPRTNQ9H040 489 aaPredicted RBP13.56□□□□□ -0.24
DDX55-209ENST00000542286 ADGRL4Q9HBW9 690 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 POMT2Q9UKY4 750 aa13.56□□□□□ -0.24
DDX55-209ENST00000542286 CLDN16Q9Y5I7 305 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms