RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 EPXP11678 715 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 NTSR1P30989 418 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 GABRA3P34903 492 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 CCR4P51679 360 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 KIAA1024LP59773 190 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 SIGLEC14Q08ET2 396 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 UBE2Q1Q7Z7E8 422 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 ZAR1Q86SH2 424 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 OR52B4Q8NGK2 314 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 UBL7Q96S82 380 aaPredicted RBP14.13□□□□□ -0.15
CNOT9-208ENST00000542068 ZNF436Q9C0F3 470 aaPredicted RBP14.13□□□□□ -0.15
CNOT9-208ENST00000542068 IL21RQ9HBE5 538 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 MED17Q9NVC6 651 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 HRASLS2Q9NWW9 162 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 MED31Q9Y3C7 131 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 ASXL3Q9C0F0 2248 aa14.13□□□□□ -0.15
CNOT9-208ENST00000542068 A0A1W2PPL8 197 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 GXYLT2A0PJZ3 443 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 MEIS3P1A6NDR6 274 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 SHOXO15266 292 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 COL9A1P20849 921 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 PGDP52209 483 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 PPP1CAP62136 330 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 GPR139Q6DWJ6 353 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 NHLRC1Q6VVB1 395 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 MEIOBQ8N635 442 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 GATSQ8NAP1 163 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 PGLYRP3Q96LB9 341 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 ZNF681Q96N22 645 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 NKX2-4Q9H2Z4 354 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 C12orf4Q9NQ89 552 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 GDE1Q9NZC3 331 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 RPS6KB2Q9UBS0 482 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 LINC00862A6NCI5 91 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 C4orf47A7E2U8 309 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 UBL3O95164 117 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 TRA2BP62995 288 aaKnown RBP14.12□□□□□ -0.15
CNOT9-208ENST00000542068 ACSM1Q08AH1 577 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 COL28A1Q2UY09 1125 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 DNAAF1Q8NEP3 725 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 TTC9Q92623 222 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 RAB11FIP5Q9BXF6 653 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 NOX4Q9NPH5 578 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 CA10Q9NS85 328 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 KCNE5Q9UJ90 142 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 YBX2Q9Y2T7 364 aaKnown RBP14.12□□□□□ -0.15
CNOT9-208ENST00000542068 J3QRE1 110 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 RCBTB2O95199 551 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 ERGP11308 486 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 ZNF3P17036 446 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 STX4Q12846 297 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 NDUFAF6Q330K2 333 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 VN1R4Q7Z5H5 301 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 TAF8Q7Z7C8 310 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 C1orf216Q8TAB5 229 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 CNOT9Q92600 299 aaKnown RBP14.12□□□□□ -0.15
CNOT9-208ENST00000542068 SFXN2Q96NB2 322 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 MEPEQ9NQ76 525 aaPredicted RBP14.12□□□□□ -0.15
CNOT9-208ENST00000542068 MAB21L2Q9Y586 359 aa14.12□□□□□ -0.15
CNOT9-208ENST00000542068 MEIKINA0A087WXM9 373 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 RPS10-NUDT3A0A1W2PQS6 291 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 DUXAA6NLW8 204 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 PLPP2O43688 288 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 SELENOFO60613 162 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 EGFP01133 1207 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 NDUFS1P28331 727 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 RUNX2Q13950 521 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 GPR18Q14330 331 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 SHHQ15465 462 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 MRM1Q6IN84 353 aaKnown RBP14.11□□□□□ -0.15
CNOT9-208ENST00000542068 FIGLAQ6QHK4 219 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 C10orf53Q8N6V4 93 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 ZBTB44Q8NCP5 570 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 MOSPD2Q8NHP6 518 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 MS4A4EQ96PG1 132 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 GINS4Q9BRT9 223 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 TCEAL2Q9H3H9 227 aaPredicted RBP14.11□□□□□ -0.15
CNOT9-208ENST00000542068 IER3IP1Q9Y5U9 82 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 STX11O75558 287 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 RLN1P04808 185 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 FCARP24071 287 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 MAP2K6P52564 334 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 OPCMLQ14982 345 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 HSD17B12Q53GQ0 312 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 POMZP3Q6PJE2 187 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 BTN2A1Q7KYR7 527 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.11□□□□□ -0.15
CNOT9-208ENST00000542068 KCTD12Q96CX2 325 aaKnown RBP14.11□□□□□ -0.15
CNOT9-208ENST00000542068 PELI1Q96FA3 418 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 AHCYL2Q96HN2 611 aaKnown RBP14.11□□□□□ -0.15
CNOT9-208ENST00000542068 ZC4H2Q9NQZ6 224 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 CMC2Q9NRP2 79 aa14.11□□□□□ -0.15
CNOT9-208ENST00000542068 L7N2F9 121 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 CPMP14384 443 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 DCTDP32321 178 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 DCST2Q5T1A1 773 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 OR5M10Q6IEU7 315 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 GPALPP1Q8IXQ4 340 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 LNX2Q8N448 690 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 LSMEM1Q8N8F7 131 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms