RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 DDIT4LQ96D03 193 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 KTI12Q96EK9 354 aaPredicted RBP8.64□□□□□ -1.03
YBX3-212ENST00000542002 ARHGDIGQ99819 225 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 SH3GL1Q99961 368 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 ZNF559Q9BR84 538 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 PTDSS2Q9BVG9 487 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 SPATA5L1Q9BVQ7 753 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 POTEKPQ9BYX7 375 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 ARMC7Q9H6L4 198 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 GP6Q9HCN6 339 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 GID8Q9NWU2 228 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 ELOVL5Q9NYP7 299 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 PRSS50Q9UI38 385 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 PRDM4Q9UKN5 801 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 ANGPT4Q9Y264 503 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 SPIN1Q9Y657 262 aaPredicted RBP8.64□□□□□ -1.03
YBX3-212ENST00000542002 LRBAP50851 2863 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 TEX15Q9BXT5 2789 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 PKDREJQ9NTG1 2253 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 IGKV3D-15A0A087WSY6 115 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 A0A0B4J2E0 115 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 A0A1B0GX12 115 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 A0A1W2PPR1 153 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 PRORSD1PA6NEY8 169 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 ZNF724A8MTY0 619 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 FTCDNL1E5RQL4 147 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 C16orf97H3BN30 126 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 NME4O00746 187 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 AKR7A3O95154 331 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 THBDP07204 575 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 C8BP07358 591 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 POU2F1P14859 743 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 UQCRBP14927 111 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 TNFRSF1BP20333 461 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 PTNP21246 168 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 FUT4P22083 530 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 PCYT1AP49585 367 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 MAP2K6P52564 334 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 CDH12P55289 794 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 SLC35A1P78382 337 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.034e-8■□□□□ 8.6
YBX3-212ENST00000542002 LTBQ06643 244 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 SLC17A1Q14916 467 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 PDK3Q15120 406 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 OR7A5Q15622 319 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 NRF1Q16656 503 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 TMEM201Q5SNT2 666 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 C1orf140Q5VVS0 124 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 C6orf89Q6UWU4 347 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 LINC00114Q6XXX2 140 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 WDR88Q6ZMY6 472 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 PATL1Q86TB9 770 aaKnown RBP8.63□□□□□ -1.03
YBX3-212ENST00000542002 GABRG1Q8N1C3 465 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 SLC38A4Q969I6 547 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 TAAR8Q969N4 342 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 LRRC46Q96FV0 321 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 DACH2Q96NX9 599 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 CCT8L2Q96SF2 557 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 TRIM2Q9C040 744 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 KLHL4Q9C0H6 718 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 LIME1Q9H400 295 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 EFCAB1Q9HAE3 211 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 CACYBPQ9HB71 228 aaKnown RBP8.63□□□□□ -1.03
YBX3-212ENST00000542002 RASSF1Q9NS23 344 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 KLHL28Q9NXS3 571 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 SEC14L4Q9UDX3 406 aa8.63□□□□□ -1.03
YBX3-212ENST00000542002 NOTCH2Q04721 2471 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 INTS1Q8N201 2190 aaKnown RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 A0A087WUJ7 227 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 SH3D21A4FU49 640 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 A6NNC1 897 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 SHOX2O60902 331 aaPredicted RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 ADAP00813 363 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 IGHV3-9P01782 118 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 KDELR2P33947 212 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 IDUAP35475 653 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 RPS5P46782 204 aaKnown RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 OR3A2P47893 321 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 SLC7A2P52569 658 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 SLC16A1P53985 500 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 FOXG1P55316 489 aaPredicted RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 RGS8P57771 180 aaPredicted RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 LIPEQ05469 1076 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 VEZF1Q14119 521 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 ALG10BQ5I7T1 473 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 ENTPD8Q5MY95 495 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 ULK3Q6PHR2 472 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 CXorf67Q86X51 503 aaPredicted RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 SLC30A8Q8IWU4 369 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 MICU2Q8IYU8 434 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 KDM8Q8N371 416 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 VANGL1Q8TAA9 524 aaPredicted RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 STK35Q8TDR2 534 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 MCHR1Q99705 422 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 ARL8BQ9NVJ2 186 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 C6orf203Q9P0P8 240 aaPredicted RBP8.62□□□□□ -1.03
YBX3-212ENST00000542002 KLHL9Q9P2J3 617 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 TESMINQ9Y4I5 508 aa8.62□□□□□ -1.03
YBX3-212ENST00000542002 MAST4O15021 2626 aa8.61□□□□□ -1.03
YBX3-212ENST00000542002 ELOVL7A1L3X0 281 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms