RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 HCRTR1O43613 425 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PEX14O75381 377 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 CEACAM5P06731 702 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 FBXO45P0C2W1 286 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 RRASP10301 218 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 CTNNB1P35222 781 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PPM1AP35813 382 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 NRG3P56975 720 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 LCN6P62502 163 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 FHL1Q13642 323 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 FAM78AQ5JUQ0 283 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 FAM199XQ6PEV8 388 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ASPGQ86U10 573 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 BOLLQ8N9W6 283 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 GATSQ8NAP1 163 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 RGP1Q92546 391 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 RBPMSQ93062 196 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 TRIM43Q96BQ3 446 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 WBP1Q96G27 269 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC35A3Q9Y2D2 325 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 MED31Q9Y3C7 131 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PCDHGA9Q9Y5G4 932 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PRICKLE3O43900 615 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 RASGRP1O95267 797 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ADH1CP00326 375 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 IFNA7P01567 189 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PGDP52209 483 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 SHC2P98077 582 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 CDK5R1Q15078 307 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 AMZ1Q400G9 498 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 GARNL3Q5VVW2 1013 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMEM81Q6P7N7 255 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR2L8Q8NGY9 312 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR10AC1Q8NH08 325 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 STK35Q8TDR2 534 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 SMIM4Q8WVI0 70 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 LCN9Q8WX39 176 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF707Q96C28 371 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ULBP3Q9BZM4 244 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 C12orf4Q9NQ89 552 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 SCP2D1Q9UJQ7 156 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 SATB2Q9UPW6 733 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 RTTNQ86VV8 2226 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 TDRD6O60522 2096 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 DOK2O60496 412 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 MYOGP15173 224 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF3P17036 446 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 MNX1P50219 401 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 HTR4Q13639 388 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 HSD17B12Q53GQ0 312 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 C2orf27AQ580R0 203 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 SRFBP1Q8NEF9 429 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR4K14Q8NGD5 310 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR56B4Q8NH76 319 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 HGDQ93099 445 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARPC5LQ9BPX5 153 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 CALML5Q9NZT1 146 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 NTMQ9P121 344 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 DTX4Q9Y2E6 619 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 AUP1Q9Y679 476 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 KCNMB2Q9Y691 235 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 PTPRSQ13332 1948 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ATP6V1G2-DDX39BF2Z307 99 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 LPLP06858 475 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR8G3PP0DMU2 310 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 NID1P14543 1247 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 PPP1CAP62136 330 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ERVK-25P63136 954 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 SIRPAP78324 504 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 BDH1Q02338 343 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 DEFB110Q30KQ9 67 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARHGAP11BQ3KRB8 267 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 CLLU1Q5K131 121 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 DCAF12L2Q5VW00 463 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 FBXO42Q6P3S6 717 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 VITQ6UXI7 678 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 CFAP77Q6ZQR2 320 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 GJD3Q8N144 294 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR2L13Q8N349 312 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 SMIM19Q96E16 107 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF764Q96H86 408 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 HSPA12BQ96MM6 686 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 GINS4Q9BRT9 223 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 GSX2Q9BZM3 304 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 ANKRD19PQ9H560 264 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 CACYBPQ9HB71 228 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 NOX3Q9HBY0 568 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 MRPL39Q9NYK5 338 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 PHF11Q9UIL8 331 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 NUP50Q9UKX7 468 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 KLHDC2Q9Y2U9 406 aa9.52□□□□□ -0.89
CDC42SE1-207ENST00000540998 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR6C68A6NDL8 312 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR5K3A6NET4 321 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 POM121BA6NF01 834 aa9.51□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZFPL1O95159 310 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms