RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ASAH2BP0C7U1 165 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 HSMCR30P0CW71 290 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 GP1BBP13224 206 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 CD36P16671 472 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 NAGAP17050 411 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 IL11P20809 199 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 TCEA1P23193 301 aaKnown RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 GADD45AP24522 165 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 SLC6A6P31641 620 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 MTNR1AP48039 350 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 NCS1P62166 190 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 ERVK-25P63136 954 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 NFATC3Q12968 1075 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 SSX1Q16384 188 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 NXNL2Q5VZ03 156 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 RPL13AP3Q6NVV1 102 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 RTL4Q6ZR62 310 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 ERI1Q8IV48 349 aaKnown RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 CYP4Z2PQ8N1L4 340 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 SIRT6Q8N6T7 355 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 C10orf53Q8N6V4 93 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 SLC37A3Q8NCC5 494 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 OR4K13Q8NH42 304 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 M1APQ8TC57 530 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 TTC9Q92623 222 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 RASD2Q96D21 266 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 TMCO6Q96DC7 493 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 ERMAPQ96PL5 475 aaPredicted RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 SLC19A3Q9BZV2 496 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 CDCP1Q9H5V8 836 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 RNF167Q9H6Y7 350 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 KLHL1Q9NR64 748 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 KLRF1Q9NZS2 232 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 FARSAQ9Y285 508 aaKnown RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 TMED7Q9Y3B3 224 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 ZNF337Q9Y3M9 751 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 PCDHGA1Q9Y5H4 931 aa11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 CHCHD2Q9Y6H1 151 aaPredicted RBP11.13□□□□□ -0.63
AP003559.1-201ENST00000540906 LOC101059948A0A1B0GTJ6 334 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 EFNA2O43921 213 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 SUSD5O60279 629 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 GFRA3O60609 400 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 NPIPB7O75200 414 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 RAB36O95755 333 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 RAB40ALP0C0E4 278 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 LIMS3P0CW19 117 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 LIMS4P0CW20 117 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PRKCAP17252 672 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 SLC2A5P22732 501 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 HTR1FP30939 366 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 VBP1P61758 197 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PSPHP78330 225 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 FOXF1Q12946 379 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 ITGADQ13349 1161 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 MED22Q15528 200 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 EXT1Q16394 746 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 OR2G6Q5TZ20 316 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PRAMEF20Q5VT98 475 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 IL20RBQ6UXL0 311 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 NDUFAF7Q7L592 441 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 NANOGP1Q8N7R0 232 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 SDR9C7Q8NEX9 313 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 OR52E2Q8NGJ4 325 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 OR9Q1Q8NGQ5 310 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 C9orf43Q8TAL5 461 aaPredicted RBP11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 NDNFQ8TB73 568 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 RAB2BQ8WUD1 216 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 CCNL2Q96S94 520 aaPredicted RBP11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 DDOQ99489 341 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 ZPBPQ9BS86 351 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PRRG3Q9BZD7 231 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 C12orf10Q9HB07 376 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PROK2Q9HC23 129 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 FBXL2Q9UKC9 423 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 VDAC3Q9Y277 283 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 AHCTF1Q8WYP5 2266 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PROB1E7EW31 1015 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 G3V3Y1 287 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 BLOC1S5-TXNDC5H3BN57 136 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 J3QRE1 110 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 TNFSF15O95150 251 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 F13BP05160 661 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 PEPDP12955 493 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 CXCR1P25024 350 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 UQCRC1P31930 480 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 CASP3P42574 277 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 POLR2HP52434 150 aaKnown RBP11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 DNASE1L3Q13609 305 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 TSTQ16762 297 aaKnown RBP11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 B3GNTL1Q67FW5 361 aaPredicted RBP11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 GLRX5Q86SX6 157 aa11.12□□□□□ -0.63
AP003559.1-201ENST00000540906 P2RY8Q86VZ1 359 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms