RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 A8MUA0 341 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 GNB5O14775 395 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 SEC14L5O43304 696 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 TSPAN2O60636 221 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 MYF5P13349 255 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 PNLIPP16233 465 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 INSL4Q14641 139 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 CARTPTQ16568 116 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 GDPD3Q7L5L3 318 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 GPR135Q8IZ08 494 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 DTX3Q8N9I9 347 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 LRRC75AQ8NAA5 344 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 OR52E2Q8NGJ4 325 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 KIAA1143Q96AT1 154 aaPredicted RBP12.59□□□□□ -0.39
RTN3-210ENST00000540798 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 ART5Q96L15 291 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 TBX5Q99593 518 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 ATF6BQ99941 703 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 IER3IP1Q9Y5U9 82 aa12.59□□□□□ -0.39
RTN3-210ENST00000540798 LOC105371267A0A1B0GV96 52 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 A0A1W2PQD3 144 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 SC5DO75845 299 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 DCNP07585 359 aaKnown RBP12.58□□□□□ -0.4
RTN3-210ENST00000540798 TAS2R43P59537 309 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 PRPS1P60891 318 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 RPS7P62081 194 aaKnown RBP12.58□□□□□ -0.4
RTN3-210ENST00000540798 VWA2Q5GFL6 755 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 DDI2Q5TDH0 399 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 COX15Q7KZN9 410 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 Q7L0L9 218 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 POMGNT2Q8NAT1 580 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 SDR9C7Q8NEX9 313 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 NEIL3Q8TAT5 605 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 CDX2Q99626 313 aaPredicted RBP12.58□□□□□ -0.4
RTN3-210ENST00000540798 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 ZNF229Q9UJW7 825 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 HIF3AQ9Y2N7 669 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 ARID1BQ8NFD5 2236 aaPredicted RBP12.58□□□□□ -0.4
RTN3-210ENST00000540798 C2orf92A0A1B0GVN3 265 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 SYNDIG1LA6NDD5 238 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 E9PI62 339 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 MRPL3P09001 348 aaKnown RBP12.58□□□□□ -0.4
RTN3-210ENST00000540798 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
RTN3-210ENST00000540798 HOXA6P31267 233 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 EGR4Q05215 589 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 TRAM1Q15629 374 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 ZNF74Q16587 644 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 SNAP47Q5SQN1 464 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 XKRXQ6PP77 449 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 GATSQ8NAP1 163 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 PHOSPHO1Q8TCT1 267 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 RTN4RQ9BZR6 473 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 TGIF2Q9GZN2 237 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 VN1R1Q9GZP7 353 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 RNF32Q9H0A6 362 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 SIT1Q9Y3P8 196 aa12.58□□□□□ -0.4
RTN3-210ENST00000540798 OR6C76A6NM76 312 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CASKO14936 926 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ICOSLGO75144 302 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 TFP02787 698 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 PRKACBP22694 351 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 MTNR1BP49286 362 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 DEFA1P59665 94 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 DEFA3P59666 94 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 SLC35D3Q5M8T2 416 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 SSX6Q7RTT6 188 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 OR1N1Q8NGS0 311 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 OR4K13Q8NH42 304 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CHAC2Q8WUX2 184 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 DAZLQ92904 295 aaKnown RBP12.57□□□□□ -0.4
RTN3-210ENST00000540798 CCDC74AQ96AQ1 378 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 PGLYRP3Q96LB9 341 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 WWTR1Q9GZV5 400 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 C14orf119Q9NWQ9 140 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ADAM18Q9Y3Q7 739 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ASXL3Q9C0F0 2248 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CD8B2A6NJW9 211 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
RTN3-210ENST00000540798 DVL2O14641 736 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 TMCC2O75069 709 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 GYPBP06028 91 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ASAH2BP0C7U1 165 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CD8BP10966 210 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 APEHP13798 732 aaKnown RBP12.57□□□□□ -0.4
RTN3-210ENST00000540798 PPP3R1P63098 170 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 BAK1Q16611 211 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 DMKNQ6E0U4 476 aaPredicted RBP12.57□□□□□ -0.4
RTN3-210ENST00000540798 TMPRSS9Q7Z410 1059 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 C17orf47Q8NEP4 570 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 HTRA1Q92743 480 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms