RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SYT14P1Q58G82 188 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 PDSS1Q5T2R2 415 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 OR2T5Q6IEZ7 315 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 C5orf46Q6UWT4 87 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 ZNF605Q86T29 641 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 MEIOBQ8N635 442 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 OR2T29Q8NH02 315 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 PYDC1Q8WXC3 89 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 COX4I2Q96KJ9 171 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 TIMP4Q99727 224 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 SPRR3Q9UBC9 169 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 A0A1W2PRQ8 180 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 B8ZZF3 427 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 BCKDKO14874 412 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 FCGR1AP12314 374 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 IL11P20809 199 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 PTGS2P35354 604 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 RBM34P42696 430 aaKnown RBP13.9□□□□□ -0.19
DDB1-216ENST00000539739 DGCR6Q14129 220 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 ZNF362Q5T0B9 420 aaPredicted RBP13.9□□□□□ -0.19
DDB1-216ENST00000539739 RRM2BQ7LG56 351 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 NKAIN4Q8IVV8 208 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 PM20D2Q8IYS1 436 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 KLHL15Q96M94 604 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 EPYCQ99645 322 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 TMEM43Q9BTV4 400 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 IL20Q9NYY1 176 aa13.9□□□□□ -0.19
DDB1-216ENST00000539739 C6orf203Q9P0P8 240 aaPredicted RBP13.9□□□□□ -0.19
DDB1-216ENST00000539739 ZMAT5Q9UDW3 170 aaKnown RBP13.9□□□□□ -0.19
DDB1-216ENST00000539739 MED12Q93074 2177 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 SEC14L5O43304 696 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 DEAF1O75398 565 aaPredicted RBP13.89□□□□□ -0.19
DDB1-216ENST00000539739 TIPRLO75663 272 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 LYPD3O95274 346 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 OPN1LWP04000 364 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 ABOP16442 354 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 ZNF708P17019 499 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
DDB1-216ENST00000539739 SRYQ05066 204 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 SOWAHCQ53LP3 525 aaPredicted RBP13.89□□□□□ -0.19
DDB1-216ENST00000539739 FGD3Q5JSP0 725 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 LINC00114Q6XXX2 140 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 ESPNLQ6ZVH7 1005 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 CHMP1BQ7LBR1 199 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 UBQLNLQ8IYU4 475 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 ST6GALNAC3Q8NDV1 305 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 OR52J3Q8NH60 311 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 TMEM239Q8WW34 195 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 EME1Q96AY2 570 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 PRSS27Q9BQR3 290 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 POTEKPQ9BYX7 375 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 SLC19A3Q9BZV2 496 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 REEP1Q9H902 201 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 TNFRSF10DQ9UBN6 386 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 CAMK2AQ9UQM7 478 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 HDGFL3Q9Y3E1 203 aa13.89□□□□□ -0.19
DDB1-216ENST00000539739 TNFRSF11BO00300 401 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 EIF1AYO14602 144 aaKnown RBP13.88□□□□□ -0.19
DDB1-216ENST00000539739 CLOCKO15516 846 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 PRB1P04280 392 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 CPN1P15169 458 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 FASP25445 335 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 CLDN18P56856 261 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 CLDN20P56880 219 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 RPS3AP61247 264 aaKnown RBP13.88□□□□□ -0.19
DDB1-216ENST00000539739 GK3PQ14409 553 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 DCST1Q5T197 706 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 ZNF730Q6ZMV8 503 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 WDR88Q6ZMY6 472 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 TMEM255BQ8WV15 326 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 ACOT11Q8WXI4 607 aaPredicted RBP13.88□□□□□ -0.19
DDB1-216ENST00000539739 WDYHV1Q96HA8 205 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 OR5B2Q96R09 309 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 KLHL4Q9C0H6 718 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 OR11A1Q9GZK7 315 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 S100A14Q9HCY8 104 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 PALMDQ9NP74 551 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 TIGARQ9NQ88 270 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 MAN2C1Q9NTJ4 1040 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 DNAJB9Q9UBS3 223 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 MED31Q9Y3C7 131 aa13.88□□□□□ -0.19
DDB1-216ENST00000539739 SAMHD1Q9Y3Z3 626 aaKnown RBP13.88□□□□□ -0.19
DDB1-216ENST00000539739 A0A0J9YW62 118 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 H0Y3Z8 333 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 OR2T1O43869 369 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 AHSA1O95433 338 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 LDLRP01130 860 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 SHC1P29353 583 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 HMGA2P52926 109 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■□□ 14.9
DDB1-216ENST00000539739 C1orf140Q5VVS0 124 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 GGNQ86UU5 652 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 RNF113BQ8IZP6 322 aaKnown RBP13.87□□□□□ -0.19
DDB1-216ENST00000539739 ZNF843Q8N446 348 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 OR2V1Q8NHB1 315 aa13.87□□□□□ -0.19
DDB1-216ENST00000539739 ALPK1Q96QP1 1244 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms