RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CDHR4A6H8M9 788 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OR6C74A6NCV1 312 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TRIM77I1YAP6 450 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 BHLHE40O14503 412 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TNFSF14O43557 240 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ACSM4P0C7M7 580 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC35G6P0C7Q6 338 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 HK1P19367 917 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 RPS4Y1P22090 263 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TNFRSF4P43489 277 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 PPP1CAP62136 330 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TCTE1Q5JU00 501 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 STPG1Q5TH74 334 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 FIGNL1Q6PIW4 674 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 METAP1DQ6UB28 335 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GJD3Q8N144 294 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OR13C2Q8NGS9 318 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 MOSPD2Q8NHP6 518 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 FAM3CQ92520 227 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 NR4A3Q92570 626 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 RBPMSQ93062 196 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 PTP4A1Q93096 173 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 FBXW5Q969U6 566 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ELSPBP1Q96BH3 223 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ZMYND19Q96E35 227 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 SERINC2Q96SA4 455 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 STARD5Q9NSY2 213 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 NUP50Q9UKX7 468 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GXYLT2A0PJZ3 443 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 IRGMA1A4Y4 181 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 MEIS3P1A6NDR6 274 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 LRRC72A6NJI9 287 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 RASGRP1O95267 797 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 KLF8O95600 359 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 IFNA7P01567 189 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 LCN1P31025 176 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 HSF2Q03933 536 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 MGAT2Q10469 447 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 OR1Q1Q15612 314 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 DCST2Q5T1A1 773 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 FIGLAQ6QHK4 219 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 RPLP0P6Q8NHW5 317 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 SIDT1Q9NXL6 827 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 CLDND1Q9NY35 253 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 PCOLCE2Q9UKZ9 415 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF346Q9UL40 294 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 C19orf53Q9UNZ5 99 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 PLATP00750 562 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 TFP02787 698 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 HOXB2P14652 356 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 M6PRP20645 277 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 ACSM1Q08AH1 577 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 NFATC4Q14934 902 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 PRPF38BQ5VTL8 546 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC51BQ86UW2 128 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 IL21RQ9HBE5 538 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 MCCC2Q9HCC0 563 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 MEPEQ9NQ76 525 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 MGAT4CQ9UBM8 478 aa11.57□□□□□ -0.56
SFSWAP-208ENST00000539506 TICRRQ7Z2Z1 1910 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 UNC119BA6NIH7 251 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 ACOD1A6NK06 481 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 LRRN3E7EW58 273 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 PRR23D1E9PI22 279 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 H0YGG7 62 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 CYR61O00622 381 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 KDM4BO94953 1096 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 PRR23D2P0DMB1 279 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 NPR2P20594 1047 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 GDNFP39905 211 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 ADH7P40394 386 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 ARF3P61204 181 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 TAGLNQ01995 201 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 OR5M10Q6IEU7 315 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 NIPAL3Q6P499 406 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 PRSS42Q7Z5A4 293 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 KCNN2Q9H2S1 579 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 LRRN3Q9H3W5 708 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 MRPL39Q9NYK5 338 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 ACTR10Q9NZ32 417 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 ZMIZ1Q9ULJ6 1067 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 B3GALT2O43825 422 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 FMO6PO60774 539 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 CXCL2P19875 107 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 RAB3BP20337 219 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 BTG1P62324 171 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 OPCMLQ14982 345 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 ARSKQ6UWY0 536 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 KCTD20Q7Z5Y7 419 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 OR6M1Q8NGM8 313 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 OR52N1Q8NH53 320 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 LGALS14Q8TCE9 139 aa11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 BRIX1Q8TDN6 353 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-208ENST00000539506 TMEM239Q8WW34 195 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms