RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 A8MVM7 634 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.16
RPAIN-206ENST00000539417 GGT1P19440 569 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 NTF4P34130 210 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 CLK1P49759 484 aaKnown RBP14.03□□□□□ -0.16
RPAIN-206ENST00000539417 ASCL1P50553 236 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 OR7A5Q15622 319 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 ABLIM2Q6H8Q1 611 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 ZNF474Q6S9Z5 364 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-206ENST00000539417 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.03□□□□□ -0.16
RPAIN-206ENST00000539417 RNF217Q8TC41 542 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 SLC38A4Q969I6 547 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 GMPPAQ96IJ6 420 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-206ENST00000539417 POTEKPQ9BYX7 375 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 ENKD1Q9H0I2 346 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 C12orf49Q9H741 205 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 RPS6KB2Q9UBS0 482 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 SEC14L4Q9UDX3 406 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 SNX13Q9Y5W8 968 aa14.03□□□□□ -0.16
RPAIN-206ENST00000539417 LIPT2A6NK58 231 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 ELOA3DA6NLF2 546 aaPredicted RBP14.02□□□□□ -0.16
RPAIN-206ENST00000539417 A8MXE2 369 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 GSTA4O15217 222 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 CYTIPO60759 359 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 AKR7A3O95154 331 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 PLGP00747 810 aaPredicted RBP14.02□□□□□ -0.16
RPAIN-206ENST00000539417 SERPINA1P01009 418 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 CRHP06850 196 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 UQCRC1P31930 480 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 IDUAP35475 653 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 RPS5P46782 204 aaKnown RBP14.02□□□□□ -0.16
RPAIN-206ENST00000539417 NCALDP61601 193 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 SELENOWP63302 87 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 CSNK2A1P68400 391 aaPredicted RBP14.02□□□□□ -0.16
RPAIN-206ENST00000539417 MXRA7P84157 204 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 H3F3AP84243 136 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 LTBQ06643 244 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 ELOA3BQ3SY89 546 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 FBXL19-AS1Q494R0 122 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 C1orf140Q5VVS0 124 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 ULK3Q6PHR2 472 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 TRPM8Q7Z2W7 1104 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 RANBP3LQ86VV4 465 aaPredicted RBP14.02□□□□□ -0.16
RPAIN-206ENST00000539417 FAM86B1Q8N7N1 296 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 TMEM99Q8N816 258 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 ELOA3Q8NG57 546 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 ADAMTS16Q8TE57 1224 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 PCDHAC1Q9H158 963 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 TMEM27Q9HBJ8 222 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 GALNT8Q9NY28 637 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 TRAPPC4Q9Y296 219 aa14.02□□□□□ -0.16
RPAIN-206ENST00000539417 A0A087WUJ7 227 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF716A6NP11 495 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 FTCDNL1E5RQL4 147 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 LRRN3E7EW58 273 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 FMO6PO60774 539 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 PRKD3O94806 890 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 UBOX5O94941 541 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF682O95780 498 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 PRF1P14222 555 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 CBLP22681 906 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 P2RY4P51582 365 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 FAM27E3Q08E93 113 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 RASGEF1BQ0VAM2 473 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 FOXD4Q12950 439 aaPredicted RBP14.01□□□□□ -0.17
RPAIN-206ENST00000539417 GLYATQ6IB77 296 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 LINC00114Q6XXX2 140 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 MEX3BQ6ZN04 569 aaKnown RBP14.01□□□□□ -0.17
RPAIN-206ENST00000539417 DEF8Q6ZN54 512 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 CBLL1Q75N03 491 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 TSEN54Q7Z6J9 526 aaKnown RBP14.01□□□□□ -0.17
RPAIN-206ENST00000539417 STK35Q8TDR2 534 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 RASSF5Q8WWW0 418 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 PROX1Q92786 737 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 RNASE6Q93091 150 aaKnown RBP14.01□□□□□ -0.17
RPAIN-206ENST00000539417 TAAR8Q969N4 342 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 PRSS27Q9BQR3 290 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 RBM24Q9BX46 236 aaKnown RBP14.01□□□□□ -0.17
RPAIN-206ENST00000539417 C12orf10Q9HB07 376 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 CHST11Q9NPF2 352 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 ADPRHL2Q9NX46 363 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 BAG5Q9UL15 447 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 SLC7A7Q9UM01 511 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
RPAIN-206ENST00000539417 FKBP2P26885 142 aaKnown RBP14□□□□□ -0.17
RPAIN-206ENST00000539417 YAP1P46937 504 aaKnown RBP14□□□□□ -0.17
RPAIN-206ENST00000539417 MAP2K6P52564 334 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 CTBP2P56545 445 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 PIN1Q13526 163 aaPredicted RBP14□□□□□ -0.17
RPAIN-206ENST00000539417 RNPS1Q15287 305 aaKnown RBP14□□□□□ -0.17
RPAIN-206ENST00000539417 FXNQ16595 210 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 GDF7Q7Z4P5 450 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 MCEMP1Q8IX19 187 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 DMRTC2Q8IXT2 367 aaPredicted RBP14□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF295-AS1Q8N0V1 137 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 OR6K3Q8NGY3 331 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 DNAJA4Q8WW22 397 aaPredicted RBP14□□□□□ -0.17
RPAIN-206ENST00000539417 FAM162AQ96A26 154 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 SLC47A1Q96FL8 570 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 AMBRA1Q9C0C7 1298 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms