RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CLK1P49759 484 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CRISP1P54107 249 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CTBP2P56545 445 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ESRRGP62508 458 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PPP2R2BQ00005 443 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SRYQ05066 204 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NPRL3Q12980 569 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MED21Q13503 144 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR7A5Q15622 319 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C6orf52Q5T4I8 152 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ANKRD34AQ69YU3 496 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 KDM4DQ6B0I6 523 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAHD1Q6P587 224 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IGFL3Q6UXB1 125 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 WDR88Q6ZMY6 472 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZER1Q7Z7L7 766 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 UBQLNLQ8IYU4 475 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GTPBP8Q8N3Z3 284 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAM109AQ8N4B1 249 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MEIOBQ8N635 442 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMEM251Q8N6I4 163 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TEX19Q8NA77 164 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SETD9Q8NE22 299 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FANK1Q8TC84 345 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 KTI12Q96EK9 354 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF570Q96NI8 536 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NAA11Q9BSU3 229 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IFT27Q9BW83 186 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 POTEKPQ9BYX7 375 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR11A1Q9GZK7 315 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ADNPQ9H2P0 1102 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TIGARQ9NQ88 270 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 QPCTLQ9NXS2 382 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RAB26Q9ULW5 256 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TP53TG5Q9Y2B4 290 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MRPS18CQ9Y3D5 142 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 WDFY3Q8IZQ1 3526 aa9.64□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TRGV5A0A0B4J1U4 118 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LRRC3CA6NJW4 275 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TAF4O00268 1085 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 EIF1AYO14602 144 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 BCKDKO14874 412 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZIC3O60481 467 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LYPD3O95274 346 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MT-ATP6P00846 226 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SFTPCP11686 197 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FUT4P22083 530 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FPR3P25089 353 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ELK4P28324 431 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC6A6P31641 620 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CAPGP40121 348 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OMPP47874 163 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GSSP48637 474 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SMSP52788 366 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CDC42P60953 191 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RPS3AP61247 264 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RAC1P63000 192 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CSNK2A1P68400 391 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC35A1P78382 337 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IL5RAQ01344 420 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC36A3Q495N2 470 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZBED5Q49AG3 693 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SYT14P1Q58G82 188 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC25A53Q5H9E4 307 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAM69AQ5T7M9 428 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMEM225Q6GV28 225 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C19orf48Q6RUI8 117 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 KLHL17Q6TDP4 642 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAM180AQ6UWF9 173 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LINC00114Q6XXX2 140 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMPRSS11FQ6ZWK6 438 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZFP62Q8NB50 900 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TAAR8Q969N4 342 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OTULINQ96BN8 352 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CNBD2Q96M20 576 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC38A2Q96QD8 506 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 KLHDC3Q9BQ90 382 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PSD2Q9BQI7 771 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ADI1Q9BV57 179 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TSSK6Q9BXA6 273 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PRRG4Q9BZD6 226 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR2B2Q9GZK3 357 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C20orf141Q9NUB4 165 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 FAM118AQ9NWS6 357 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LUZP4Q9P127 313 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 B3GNT3Q9Y2A9 372 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC6A5Q9Y345 797 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 AP4B1Q9Y6B7 739 aa9.63□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TRAV27A0A087WT01 109 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LOC100130705A0A1B0GUX0 176 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 A0A1W2PNR3 127 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NPIPA5E9PKD4 350 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 C11orf98E9PRG8 122 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 H0YAE9 185 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RNF13O43567 381 aa9.62□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SERPINI2O75830 405 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms