RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LIPHQ8WWY8 451 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 LCORQ96JN0 433 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-208ENST00000538333 AGAP4Q96P64 663 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 TMEM43Q9BTV4 400 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 WNT16Q9UBV4 365 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 GRIP1Q9Y3R0 1128 aa12.81□□□□□ -0.36
LIMK1-208ENST00000538333 TCRBV16S1A1N1A0A5B0 115 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 OR6C68A6NDL8 312 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SCDO00767 359 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 IMPA2O14732 288 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 OR2T7P0C7T2 308 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 PNMTP11086 282 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 FOLR1P15328 257 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SHC1P29353 583 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 RPL4P36578 427 aaKnown RBP12.8□□□□□ -0.36
LIMK1-208ENST00000538333 HCCSP53701 268 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 PRPS1P60891 318 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 P2RY14Q15391 338 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ELAVL1Q15717 326 aaKnown RBP12.8□□□□□ -0.36
LIMK1-208ENST00000538333 MZT2AQ6P582 158 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 Q7L0L9 218 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 PLXDC1Q8IUK5 500 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 UBQLNLQ8IYU4 475 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 OR51L1Q8NGJ5 315 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 OR2T27Q8NH04 317 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ABHD4Q8TB40 342 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ZPLD1Q8TCW7 415 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SLC41A2Q96JW4 573 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 NMNAT3Q96T66 252 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 CNN2Q99439 309 aaKnown RBP12.8□□□□□ -0.36
LIMK1-208ENST00000538333 KLHDC3Q9BQ90 382 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 MARCH7Q9H992 704 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 CLCA3PQ9Y6N3 262 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SPEGQ15772 3267 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ELOA3DA6NLF2 546 aaPredicted RBP12.8□□□□□ -0.36
LIMK1-208ENST00000538333 PLA2G10O15496 165 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF264O43296 627 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 DUX1O43812 170 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 IMPDH2P12268 514 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 HPGDP15428 266 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 PTBP1P26599 531 aaKnown RBP eCLIP12.8□□□□□ -0.36
LIMK1-208ENST00000538333 PYCR1P32322 319 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 DIO1P49895 249 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 EGR4Q05215 589 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SLC3A1Q07837 685 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF74Q16587 644 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ELOA3BQ3SY89 546 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 HBMQ6B0K9 141 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SIX5Q8N196 739 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ELOA3Q8NG57 546 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 MOSPD2Q8NHP6 518 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 SHDQ96IW2 340 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 NUDT9Q9BW91 350 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 C11orf54Q9H0W9 315 aaPredicted RBP12.8□□□□□ -0.36
LIMK1-208ENST00000538333 WDR70Q9NW82 654 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 NPAP1Q9NZP6 1156 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 HIF3AQ9Y2N7 669 aa12.8□□□□□ -0.36
LIMK1-208ENST00000538333 CABIN1Q9Y6J0 2220 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 VCANP13611 3396 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 BCAT2O15382 392 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 OGG1O15527 345 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 DYRK3O43781 588 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 IDH3BO43837 385 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 GLB1P16278 677 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SPI1P17947 270 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 THBS2P35442 1172 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ACVR1BP36896 505 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 HTR3AP46098 478 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ARL4DP49703 201 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 AFF3P51826 1226 aaKnown RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 NRG3P56975 720 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 OR2B6P58173 313 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ERVK-25P63136 954 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 EBPQ15125 230 aaKnown RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 CDONQ4KMG0 1287 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 VWA2Q5GFL6 755 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 C9orf40Q8IXQ3 194 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SYS1Q8N2H4 156 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 LRRC75AQ8NAA5 344 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 OR14A16Q8NHC5 309 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 RASD2Q96D21 266 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 PELI1Q96FA3 418 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 MOGAT1Q96PD6 335 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 UBL7Q96S82 380 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ADOQ96SZ5 270 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 KLHL1Q9NR64 748 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SDK1Q7Z5N4 2213 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 A0A0G2JK05 382 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ICOSLGO75144 302 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 NAA10P41227 235 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 CCR4P51679 360 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 GPLD1P80108 840 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms