RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 OSGIN1Q9UJX0 560 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ATP1B1P05026 303 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ERGP11308 486 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 IFNGR1P15260 489 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ACVR1BP36896 505 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 POU4F2Q12837 409 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TRAM2Q15035 370 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ALG10Q5BKT4 473 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 OR2T5Q6IEZ7 315 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 METTL2BQ6P1Q9 378 aaKnown RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 LEG1Q6P5S2 330 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 LIX1LQ8IVB5 337 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 POGLUT1Q8NBL1 392 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 OR51G2Q8NGK0 314 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 OR2T29Q8NH02 315 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 RND1Q92730 232 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 MOAP1Q96BY2 351 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 BPIFA2Q96DR5 249 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ZNF681Q96N22 645 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 KATNB1Q9BVA0 655 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ENKD1Q9H0I2 346 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 WDR54Q9H977 334 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TMEM181Q9P2C4 612 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ZNF346Q9UL40 294 aaKnown RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 TRBV4-1A0A0J9YWV2 114 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 IQCMA0A1B0GVH7 501 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TRAPPC13A5PLN9 417 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 M0R1B8 84 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 SOCS6O14544 535 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ZNF195O14628 629 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ZNF205O95201 554 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 FARS2O95363 451 aaKnown RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 GPANK1O95872 356 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 PEX2P28328 305 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 CDAP32320 146 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 IDUAP35475 653 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 MAGEA8P43361 318 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 EEFSECP57772 596 aaKnown RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 PLP2Q04941 152 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 SCN1BQ07699 218 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 GINS1Q14691 196 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 RTP5Q14D33 572 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 NEDD8Q15843 81 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 ETFDHQ16134 617 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 PEAR1Q5VY43 1037 aaPredicted RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 FRRS1Q6ZNA5 592 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 TUSC5Q8IXB3 177 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 OR7G1Q8NGA0 311 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 FAR1Q8WVX9 515 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 RASSF5Q8WWW0 418 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 KTI12Q96EK9 354 aaPredicted RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 Q96M85 177 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 VSTM2LQ96N03 204 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 C19orf43Q9BQ61 176 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 SARGQ9BW04 601 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 NDEL1Q9GZM8 345 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 SIRT3Q9NTG7 399 aaPredicted RBP6.56□□□□□ -1.36
MSH6-209ENST00000538136 ICAM5Q9UMF0 924 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 DENND4CQ5VZ89 1909 aa6.56□□□□□ -1.36
MSH6-209ENST00000538136 MAGEB4O15481 346 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 AHCYL1O43865 530 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 CDC14BO60729 498 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 FAM20BO75063 409 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 WISP3O95389 354 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 DLGAP3O95886 979 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ANXA2P07355 339 aaKnown RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 B4GALT1P15291 398 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 TSFMP43897 325 aaKnown RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 BNIP1Q12981 228 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 CTU2Q2VPK5 515 aaKnown RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 ZNF813Q6ZN06 617 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 OR5AS1Q8N127 324 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 NATD1Q8N6N6 113 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 OR2AJ1Q8NGZ0 328 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SLC7A6Q92536 515 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 TMEM203Q969S6 136 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 RASD2Q96D21 266 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SYT4Q9H2B2 425 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 KCNJ16Q9NPI9 418 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 DUSP22Q9NRW4 184 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 VSX1Q9NZR4 365 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 SNX5Q9Y5X3 404 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 COMMD3-BMI1R4GMX3 469 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 GPIP06744 558 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ACVR2AP27037 513 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SOX2P48431 317 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 DIO1P49895 249 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 P2RX1P51575 399 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 C6orf52Q5T4I8 152 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 PODNL1Q6PEZ8 512 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 DLEU7Q6UYE1 221 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 MAMDC2Q7Z304 686 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 GLRX5Q86SX6 157 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 GLB1L2Q8IW92 636 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ZNF433Q8N7K0 673 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 DEFB108BQ8NET1 73 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 OR5W2Q8NH69 310 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 FANK1Q8TC84 345 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 NEK7Q8TDX7 302 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SNX33Q8WV41 574 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms