RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 GNG10P50151 68 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MRPS10P82664 201 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 KIAA0141Q14154 515 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 OR8G1Q15617 311 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 CRB2Q5IJ48 1285 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 AFMIDQ63HM1 303 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3GQ6DHY5 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3CQ6IPX1 549 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TBC1D3Q8IZP1 549 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 CLECL1Q8IZS7 167 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TTC9BQ8N6N2 239 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 BRIX1Q8TDN6 353 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 SPRYD4Q8WW59 207 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MISP3Q96FF7 219 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MED8Q96G25 268 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 BSCL2Q96G97 398 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MTERF1Q99551 399 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 EGLN1Q9GZT9 426 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RDH14Q9HBH5 336 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 BPIFA1Q9NP55 256 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 DSPPQ9NZW4 1301 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 A0A0G2JMZ2 1700 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 B4GALT3O60512 393 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 KLF8O95600 359 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 EPXP11678 715 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 DLSTP36957 453 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MAPK9P45984 424 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ACVR1Q04771 509 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MAPK14Q16539 360 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF791Q3KP31 576 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ARHGAP40Q5TG30 622 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 LIPNQ5VXI9 398 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 LIPJQ5W064 366 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RASGEF1AQ8N9B8 481 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 OR51Q1Q8NH59 317 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 CDKN2AIPNLQ96HQ2 116 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 CLCC1Q96S66 551 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RIOK2Q9BVS4 552 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ACPTQ9BZG2 426 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TWSG1Q9GZX9 223 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 GULP1Q9UBP9 304 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 RUVBL1Q9Y265 456 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF217O75362 1048 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC2A1P11166 492 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 SHC1P29353 583 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 OR2B8PP59922 312 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 MTAPQ13126 283 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 BOP1Q14137 746 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 DHCR24Q15392 516 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ZNF630Q2M218 657 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 GLT8D1Q68CQ7 371 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 ADAM5Q6NVV9 412 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 PARM1Q6UWI2 310 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 OR5D16Q8NGK9 328 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 C15orf40Q8WUR7 153 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 OR1F2PQ96R84 312 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 S100A13Q99584 98 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM231Q9H6L2 316 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TRIM36Q9NQ86 728 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 NLE1Q9NVX2 485 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 NPFFR2Q9Y5X5 522 aa10.08□□□□□ -0.8
CLSTN3-207ENST00000537408 TRBV4-1A0A0J9YWV2 114 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SHISA3A0PJX4 238 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SOAT1P35610 550 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 CDX1P47902 265 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 NRG3P56975 720 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 CDK6Q00534 326 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SPRED2Q7Z698 418 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 TSEN54Q7Z6J9 526 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ARHGAP12Q8IWW6 846 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 CCDC107Q8WV48 283 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ALG8Q9BVK2 526 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 AUNIPQ9H7T9 357 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 MRPS18AQ9NVS2 196 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SLC27A6Q9Y2P4 619 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 TMEM184BQ9Y519 407 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PCDHGC4Q9Y5F7 938 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PCDHGA5Q9Y5G8 931 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PCDHGA1Q9Y5H4 931 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ZDBF2Q9HCK1 2354 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 A0A1W2PPE3 182 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SMAD6O43541 496 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PRNPP04156 253 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 IGFBP1P08833 259 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ETFAP13804 333 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PBLDP30039 288 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 RBM34P42696 430 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 SIM1P81133 766 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ZXDAP98168 799 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 GLO1Q04760 184 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ACSM1Q08AH1 577 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 RNASE10Q5GAN6 216 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
CLSTN3-207ENST00000537408 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms