RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SLC2A12Q8TD20 617 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 HHIPQ96QV1 700 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF701Q9NV72 531 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SLC7A7Q9UM01 511 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FAM183AA6NL82 134 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ADRB3P13945 408 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PRSS3P35030 304 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SLC1A3P43003 542 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 IDH3GP51553 393 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DGCR2P98153 550 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CYCSP99999 105 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ID2Q02363 134 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PLEKHN1Q494U1 663 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SPIN3Q5JUX0 258 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SUMF2Q8NBJ7 301 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR2AJ1Q8NGZ0 328 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GOT1L1Q8NHS2 421 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MYLIPQ8WY64 445 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SUSD6Q92537 303 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 RBM14Q96PK6 669 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SEC11CQ9BY50 192 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TCEAL2Q9H3H9 227 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TRABD2BA6NFA1 517 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TNFSF12O43508 249 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 B3GALT2O43825 422 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FBXO24O75426 580 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 KAT7O95251 611 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 POP4O95707 220 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 AHRP35869 848 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SGSHP51688 502 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ACTBP60709 375 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 UBE2MP61081 183 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ACTG1P63261 375 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 KCNJ10P78508 379 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CHAF1BQ13112 559 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 KIAA0141Q14154 515 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PXKQ7Z7A4 578 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LILRB2Q8N423 598 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR52E2Q8NGJ4 325 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ECHDC3Q96DC8 303 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SLC41A3Q96GZ6 507 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ALX4Q9H161 411 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CLEC4EQ9ULY5 219 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 KCNIP3Q9Y2W7 256 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GABARAPH6UMI1 98 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SELENOFO60613 162 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LATS1O95835 1130 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MT-ND4LP03901 98 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LAG3P18627 525 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CPT2P23786 658 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 BDKRB2P30411 391 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MAT2AP31153 395 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SERPINF1P36955 418 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CXADRP78310 365 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GRM7Q14831 915 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GLDNQ6ZMI3 551 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FCRLAQ7L513 359 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CCDC116Q8IYX3 515 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ARL14EPQ8N8R7 260 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 L3MBTL4Q8NA19 623 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR5AK2Q8NH90 309 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PNPLA2Q96AD5 504 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DNAJA3Q96EY1 480 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LRFN5Q96NI6 719 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 F2RL3Q96RI0 385 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TDP1Q9NUW8 608 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SOHLH2Q9NX45 425 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PUS1Q9Y606 427 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PRSS21Q9Y6M0 314 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GGT3PA6NGU5 568 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DNASE2O00115 360 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 HLA-AP01891 365 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 HCKP08631 526 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MPC1LP0DKB6 136 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CMPK1P30085 196 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CLINT1Q14677 625 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CTSL3PQ5NE16 218 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GPR157Q5UAW9 335 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR10K2Q6IF99 312 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 USP53Q70EK8 1073 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GLB1L2Q8IW92 636 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LAS2Q8IYD9 372 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR52I1Q8NGK6 324 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ACKR4Q9NPB9 350 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 WDR81Q562E7 1941 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OTOFQ9HC10 1997 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 H7C417 338 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 K7EPK0 472 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GPRIN2O60269 458 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GYPBP06028 91 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 IGFBP1P08833 259 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SLC35G6P0C7Q6 338 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 G0S2P27469 103 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GABRR2P28476 465 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 EPHA2P29317 976 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 AKT2P31751 481 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms