RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CCR7P32248 378 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 ADRA1AP35348 466 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TNNT3P45378 269 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 XCR1P46094 333 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 HLCSP50747 726 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 CLNS1AP54105 237 aaKnown RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 CDH13P55290 713 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 MLF1P58340 268 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 SLC26A5P58743 744 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 KLHL30Q0D2K2 578 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 ABRAXAS2Q15018 415 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 EXT1Q16394 746 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 NTRK2Q16620 822 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TYSND1Q2T9J0 566 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 GPR33Q49SQ1 333 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 KLHL26Q53HC5 615 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 SFT2D3Q587I9 215 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 DNAJC21Q5F1R6 531 aaKnown RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 C1orf185Q5T7R7 199 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 MYPOPQ86VE0 399 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 PAQR7Q86WK9 346 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 RPS19BP1Q86WX3 136 aaKnown RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TMEM139Q8IV31 216 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF595Q8IYB9 648 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 SLC22A15Q8IZD6 547 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 OR2A1Q8NGT9 310 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 OR51Q1Q8NH59 317 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 LINC01560Q8TB33 94 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TFB1MQ8WVM0 346 aaKnown RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TMEM158Q8WZ71 300 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 RNASE6Q93091 150 aaKnown RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 SPATA13Q96N96 652 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 OR2A5Q96R48 311 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 DPH7Q9BTV6 452 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 TEX12Q9BXU0 123 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 C10orf88Q9H8K7 445 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 ZDHHC11Q9H8X9 412 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 C19orf25Q9UFG5 118 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 RSPH14Q9UHP6 348 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 KLF13Q9Y2Y9 288 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 HEATR5AQ86XA9 2040 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 RAI1Q7Z5J4 1906 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-207ENST00000536634 A0A087X0T9 212 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 A8MV72 311 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF487B1APH4 448 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 G3V3Y1 287 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 KLRC4-KLRK1H3BQV0 150 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SGK494L7N484 410 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 HAT1O14929 419 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 PHF1O43189 567 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 ARHGEF9O43307 516 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SMPD2O60906 423 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 GLSO94925 669 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 PGM3O95394 542 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 C1orf105O95561 183 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 FTH1P02794 183 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 FAM228BP0C875 321 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 IL1RNP18510 177 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SAT1P21673 171 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 PSMB4P28070 264 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SLC6A6P31641 620 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 FOXN2P32314 431 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 ASCL1P50553 236 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 PPIAP62937 165 aaKnown RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 HSPA14Q0VDF9 509 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 PTK6Q13882 451 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 FAM53BQ14153 422 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 FBXL19-AS1Q494R0 122 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 RIPPLY2Q5TAB7 128 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 RNASEH2BQ5TBB1 312 aaKnown RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 GARNL3Q5VVW2 1013 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 MFSD7Q6UXD7 560 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 PID1Q7Z2X4 250 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SLC13A5Q86YT5 568 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 LRRC75A-AS1Q8N1F1 130 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 NPEPL1Q8NDH3 523 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 MRGPRDQ8TDS7 321 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 HAUS1Q96CS2 278 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 CDKN2AIPNLQ96HQ2 116 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 RSRC1Q96IZ7 334 aaKnown RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 POM121L2Q96KW2 1035 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 QKIQ96PU8 341 aaKnown RBP eCLIP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 LPAR4Q99677 370 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 GBA3Q9H227 469 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SLC35C2Q9NQQ7 365 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 GIMAP4Q9NUV9 329 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 SPRR3Q9UBC9 169 aa4.55□□□□□ -1.68
CLIP1-207ENST00000536634 KMT2CQ8NEZ4 4911 aaKnown RBP4.55□□□□□ -1.68
CLIP1-207ENST00000536634 LOC100509620A0A075B734 347 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 CCDC162PA2VCL2 907 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF860A6NHJ4 632 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 TUBAL3A6NHL2 446 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 SLCO1B7G3V0H7 640 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 H0YIG0 161 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 CLDN4O14493 209 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 BCKDKO14874 412 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 DNAJB6O75190 326 aa4.54□□□□□ -1.68
CLIP1-207ENST00000536634 VPS26AO75436 327 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms