RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FIS1Q9Y3D6 152 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 DSPPQ9NZW4 1301 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 A0A096LPI6 279 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 LOC102725191A0A1B0GVB3 256 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 LIPT2A6NK58 231 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 AQP7P3A6NL99 342 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 CCT8L1PA6NM43 557 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 C9JVG2 144 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 CFLARO15519 480 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 LMX1BO60663 402 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 WNT11O96014 354 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 IGKV3-15P01624 115 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 OR12D1P0DN82 309 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 IMPDH2P12268 514 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 NR4A2P43354 598 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 KHKP50053 298 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF83P51522 516 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 CCR4P51679 360 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 FOXG1P55316 489 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC25A3Q00325 362 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 SPOCK1Q08629 439 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 EPS8Q12929 822 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 KRTAP24-1Q3LI83 254 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 TSPO2Q5TGU0 170 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 ALKBH2Q6NS38 261 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 ABHD12BQ7Z5M8 362 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 CCDC103Q8IW40 242 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 PIAS4Q8N2W9 510 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF614Q8N883 585 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 NUP37Q8NFH4 326 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 OR52N5Q8NH56 324 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 XAGE5Q8WWM1 108 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 HPS1Q92902 700 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF775Q96BV0 537 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 LINC00470Q9BZP3 86 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 OR11A1Q9GZK7 315 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 PLK3Q9H4B4 646 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
CLSTN3-206ENST00000535668 TMED7-TICAM2A0A0A6YYA0 188 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 CDHR4A6H8M9 788 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 B9A039 149 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 TACSTD2P09758 323 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 MYZAPP0CAP1 466 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 IDH2P48735 452 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 PPOXP50336 477 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 SH3BGRP55822 239 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 CHRNEQ04844 493 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 GNA13Q14344 377 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 MAPK11Q15759 364 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 TNFAIP8L3Q5GJ75 292 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 UBE2J2Q8N2K1 259 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 OR52E4Q8NGH9 312 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 RFWD2Q8NHY2 731 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF563Q8TA94 476 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 CNOT9Q92600 299 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 SHARPINQ9H0F6 387 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF442Q9H7R0 627 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 POU2F3Q9UKI9 436 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 TMED7Q9Y3B3 224 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 RAP2CQ9Y3L5 183 aa9.78□□□□□ -0.84
CLSTN3-206ENST00000535668 CFAP73A6NFT4 308 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ATP8B1O43520 1251 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF432O94892 652 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 IGHV3-9P01782 118 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 SERPINE1P05121 402 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 GPIP06744 558 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 DBIP07108 87 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ZCCHC18P0CG32 403 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 TFPIP10646 304 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 UQCRBP14927 111 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF23P17027 643 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 IGFBP5P24593 272 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 TACR3P29371 465 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 SERPINF1P36955 418 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ACAA2P42765 397 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 PDLIM4P50479 330 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 RPL14P50914 215 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ANXA11P50995 505 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 MVDP53602 400 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 SQLEQ14534 574 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 PGS1Q32NB8 556 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 RNF220Q5VTB9 566 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 FAM166AQ6J272 317 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 UGT2A3Q6UWM9 527 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 DEF8Q6ZN54 512 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ZCCHC23Q6ZST2 131 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF627Q7L945 461 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 CCDC36Q8IYA8 594 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 GSPT2Q8IYD1 628 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 TRIML2Q8N7C3 387 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 GLB1L3Q8NCI6 653 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 OR4F15Q8NGB8 312 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 OR4A15Q8NGL6 344 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 BCL2L2Q92843 193 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 MSI2Q96DH6 328 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 SORT1Q99523 831 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 DPY30Q9C005 99 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms