RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 COX18Q8N8Q8 333 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ZIC4Q8N9L1 334 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 CDKL2Q92772 493 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 POP5Q969H6 163 aaKnown RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ARL8AQ96BM9 186 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 AURKBQ96GD4 344 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF385AQ96PM9 386 aaKnown RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 THUMPD3Q9BV44 507 aaKnown RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 OR11A1Q9GZK7 315 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 RASSF4Q9H2L5 321 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 NELFAQ9H3P2 528 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 NOX3Q9HBY0 568 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 LZTFL1Q9NQ48 299 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 MIEF1Q9NQG6 463 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 MMP26Q9NRE1 261 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 SERINC1Q9NRX5 453 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 MYEF2Q9P2K5 600 aaKnown RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 SLC9A8Q9Y2E8 581 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 MDFIC2A0A1B0GVS7 189 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CCDC189A1A4V9 331 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF503-AS2A6NEH8 195 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 TRIM49D1C9J1S8 452 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 H3BNH8 94 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 DNAJA2O60884 412 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 OR4F21O95013 312 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 PMS2P2O95744 297 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 OTCP00480 354 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 NGFP01138 241 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 IFI6P09912 130 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 ALOX5P09917 674 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 HSD3B1P14060 373 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CBR1P16152 277 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 NR4A1P22736 598 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 HSD3B2P26439 372 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 MAGEB1P43366 347 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 HTR6P50406 440 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 ATP4BP51164 291 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 OR2B6P58173 313 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 POU6F2P78424 691 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CBFBQ13951 182 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 SLC17A1Q14916 467 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 SPIN4Q56A73 249 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 OTUD3Q5T2D3 398 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-206ENST00000535290 GRTP1Q5TC63 336 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 REP15Q6BDI9 236 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CDC73Q6P1J9 531 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CCBE1Q6UXH8 406 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-206ENST00000535290 LINGO2Q7L985 606 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 AAED1Q7RTV5 226 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 SZRD1Q7Z422 152 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 TREML1Q86YW5 311 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CTAGE3PQ8IX95 158 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF614Q8N883 585 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 POMGNT2Q8NAT1 580 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 SLC25A43Q8WUT9 341 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-206ENST00000535290 RAB8BQ92930 207 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 KTI12Q96EK9 354 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-206ENST00000535290 GATA5Q9BWX5 397 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-206ENST00000535290 BTBD2Q9BX70 525 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 CRLF2Q9HC73 371 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 C1RLQ9NZP8 487 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 KLHL21Q9UJP4 597 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 NFU1Q9UMS0 254 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 WIPI2Q9Y4P8 454 aa7.05□□□□□ -1.28
CLIP1-206ENST00000535290 IGHV3OR16-10A0A075B7F0 116 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 HMX2A2RU54 273 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 NPIPB9F8W1W9 429 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 STX16-NPEPL1H3BU86 382 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CCDC188H7C350 402 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 J3QL48 77 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 PGRMC1O00264 195 aaKnown RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 STX16O14662 325 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF264O43296 627 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 HOXA3O43365 443 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 DNPH1O43598 174 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 EIF4E2O60573 245 aaKnown RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 SHOX2O60902 331 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CYP7B1O75881 506 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 SEC14L2O76054 403 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 KLHL2O95198 593 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 RPS17P08708 135 aaKnown RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ATP6V1C1P21283 382 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 PAX7P23759 505 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 RAD52P43351 418 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ATP12AP54707 1039 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF763Q0D2J5 394 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 NPRL3Q12980 569 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 TECRLQ5HYJ1 363 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ANKRD26P1Q6NSI1 321 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 SYT10Q6XYQ8 523 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 GSPT2Q8IYD1 628 aaKnown RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 NOA1Q8NC60 698 aaKnown RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 GLB1L3Q8NCI6 653 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 BHLHE22Q8NFJ8 381 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 MAGEE2Q8TD90 523 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF483Q8TF39 744 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 PYROXD1Q8WU10 500 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 ST8SIA1Q92185 356 aa7.04□□□□□ -1.28
CLIP1-206ENST00000535290 GTF3AQ92664 365 aaKnown RBP7.04□□□□□ -1.28
CLIP1-206ENST00000535290 CDS1Q92903 461 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms