RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TAS2R46P59540 309 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 DYRK1AQ13627 763 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC5A12Q1EHB4 618 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 PRAMEF9Q5VWM5 478 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 CNTN4Q8IWV2 1026 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 EGLN2Q96KS0 407 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 NMNAT2Q9BZQ4 307 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 FKRPQ9H9S5 495 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ATG4BQ9Y4P1 393 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 G3V3Y1 287 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 OR7C1O76099 320 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 DDAH2O95865 285 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ITGB2P05107 769 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 CCL11P51671 97 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 MTCP1P56278 107 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 IKZF1Q13422 519 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 GAREM2Q75VX8 874 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 RNF113BQ8IZP6 322 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 PIGQQ9BRB3 760 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 KCNJ16Q9NPI9 418 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ENPP5Q9UJA9 477 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 NALCNQ8IZF0 1738 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 MCRIP1C9JLW8 97 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF593O00488 134 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 DPP4P27487 766 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 OR51J1Q9H342 316 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF281Q9Y2X9 895 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 SERINC4A6NH21 518 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 PPP6CO00743 305 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 GMDSO60547 372 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 HPGDSO60760 199 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ENPP1P22413 925 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 DMWDQ09019 674 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 RPL22L1Q6P5R6 122 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 PM20D2Q8IYS1 436 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 C3orf30Q96M34 536 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 IL37Q9NZH6 218 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 HS3ST2Q9Y278 367 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 C1orf196B1AJZ1 125 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 SURF4O15260 269 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 P2RX6O15547 441 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 UPK1BO75841 260 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ATXN1LP0C7T5 689 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 EDN3P14138 238 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 MAGEA6P43360 314 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 CARD18P57730 90 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF585AQ6P3V2 769 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 ARFGAP1Q8N6T3 406 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 CRYGNQ8WXF5 182 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 CPNE5Q9HCH3 593 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 GNG12Q9UBI6 72 aa16.91■□□□□ 0.3
SFSWAP-203ENST00000535236 OPRD1P41143 372 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 PDLIM3Q53GG5 364 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 AADACL3Q5VUY0 350 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 C12orf45Q8N5I9 185 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 AGPAT4Q9NRZ5 378 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 hCG_1809904A0A1W2PP81 198 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 A0A1W2PPE2 198 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 A0A1W2PR64 198 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 A0A1W2PRV1 198 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 MT-ND4P03905 459 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 LMNTD1Q8N9Z9 388 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 OR4F15Q8NGB8 312 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC29A1Q99808 456 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC19A3Q9BZV2 496 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 FGF21Q9NSA1 209 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 J3KTA2 159 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 ARAFP10398 606 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 EN2P19622 333 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 NPSR1Q6W5P4 371 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 NCCRP1Q6ZVX7 275 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 ZADH2Q8N4Q0 377 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 SLAMF9Q96A28 289 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 HDAC8Q9BY41 377 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 NOX3Q9HBY0 568 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 SLC23A2Q9UGH3 650 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 KLRC4-KLRK1H3BQV0 150 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 BET1O15155 118 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 HCRTR1O43613 425 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 EIF4EP06730 217 aaKnown RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 C17orf67Q0P5P2 114 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 HSF5Q4G112 596 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 PAPD4Q6PIY7 484 aaKnown RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 CLEC14AQ86T13 490 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 ESX1Q8N693 406 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 OR4M1Q8NGD0 313 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 LCORQ96JN0 433 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 OCSTAMPQ9BR26 566 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 PLCXD1Q9NUJ7 323 aa16.9■□□□□ 0.3
SFSWAP-203ENST00000535236 A0A1W2PS29 197 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 TSPAN11A1L157 253 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 CLN5O75503 358 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 TSPAN31Q12999 210 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 GAB1Q13480 694 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 FRMPD2BQ6IN97 320 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 ADAMTSL4Q6UY14 1074 aa16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 ZNF767PQ75MW2 155 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms