RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 RPL34P49207 117 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 EIF2B2P49770 351 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 AP2S1P53680 142 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 HADHBP55084 474 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 RP1P56715 2156 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 GNG2P59768 71 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 RPL10AP62906 217 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 SLC7A9P82251 487 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 GCNT1Q02742 428 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CD300CQ08708 224 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 STX3Q13277 289 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SELPLGQ14242 412 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FASTKD3Q14CZ7 662 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 ZMYND11Q15326 602 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SPA17Q15506 151 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CEBPEQ15744 281 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 PDK4Q16654 411 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CCDC58Q4VC31 144 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 KCTD11Q693B1 232 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OR4A47Q6IF82 309 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 B3GLCTQ6Y288 498 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 WDR88Q6ZMY6 472 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 IL17RELQ6ZVW7 336 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 PEX26Q7Z412 305 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 PTAR1Q7Z6K3 402 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 SCD5Q86SK9 330 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 AMZ2Q86W34 360 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 LRRC6Q86X45 466 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CLVS1Q8IUQ0 354 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 FAM219AQ8IW50 185 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 KLHDC8AQ8IYD2 350 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CMTM8Q8IZV2 173 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 LGI2Q8N0V4 545 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 RASGEF1AQ8N9B8 481 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 BANPQ8N9N5 519 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 TMEM185AQ8NFB2 350 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OR4K1Q8NGD4 311 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OR10Q1Q8NGQ4 319 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 OR6S1Q8NH40 331 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 ZNF519Q8TB69 540 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FAM222BQ8WU58 562 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 ANKRD49Q8WVL7 239 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 GTF3AQ92664 365 aaKnown RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 ART4Q93070 314 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 DTD2Q96FN9 168 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SMARCD1Q96GM5 515 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 ZNF486Q96H40 463 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 TPD52L3Q96J77 140 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FAM71F1Q96KD3 344 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 FMO2Q99518 471 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FEVQ99581 238 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 ZBTB18Q99592 522 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SLC29A1Q99808 456 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CPNE1Q99829 537 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CCDC77Q9BR77 488 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 GON7Q9BXV9 100 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 DGCR6LQ9BY27 220 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 LINC00597Q9H2U6 94 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SNX25Q9H3E2 840 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FAM124BQ9H5Z6 455 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 RMND5AQ9H871 391 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 C10orf88Q9H8K7 445 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SIAEQ9HAT2 523 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 KCNK13Q9HB14 408 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 NMUR1Q9HB89 426 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 S100A14Q9HCY8 104 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CISHQ9NSE2 258 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 FAM212BQ9NTI7 297 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.89□□□□□ -1.95
USP48-215ENST00000534705 FAM49BQ9NUQ9 324 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 NDE1Q9NXR1 346 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 GTSE1Q9NYZ3 720 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 TMEM9Q9P0T7 183 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 UXTQ9UBK9 157 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 SLC7A8Q9UHI5 535 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CYTH4Q9UIA0 394 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 VANGL2Q9ULK5 521 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 GPR132Q9UNW8 380 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 KCNK6Q9Y257 313 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 WDR83OSQ9Y284 106 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CPQQ9Y646 472 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 CSNK1G3Q9Y6M4 447 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SPEGQ15772 3267 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 MN1Q10571 1320 aaPredicted RBP2.89□□□□□ -1.95
USP48-215ENST00000534705 WDFY3Q8IZQ1 3526 aa2.89□□□□□ -1.95
USP48-215ENST00000534705 SPTBN2O15020 2390 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ASXL3Q9C0F0 2248 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 IGHV3OR16-10A0A075B7F0 116 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ARPC4-TTLL3A0A0A6YYG9 625 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TRAV24A0A0B4J272 114 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 GOLGA8QA0A0J9YX86 632 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 A0A1W2PPK0 400 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 A0A1W2PR80 420 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ILVBLA1L0T0 632 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 XKRY2A2RUG3 117 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 GOLGA8OA6NCC3 632 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 GOLGA8NF8WBI6 632 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 H0YIV9 168 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 H3BNH8 94 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms