RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 EIF3DO15371 548 aaKnown RBP eCLIP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SIGLEC5O15389 551 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 COCHO43405 550 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LRCH4O75427 683 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ZNF821O75541 412 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CREG1O75629 220 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 RHBDL1O75783 438 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 RECQL5O94762 991 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 RGS11O94810 467 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SORBS2O94875 1100 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CTDNEP1O95476 244 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TBX18O95935 607 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MOCS2O96007 188 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LDLRP01130 860 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CRYGCP07315 174 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 UMODP07911 640 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TSPAN19P0C672 248 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MYOGP15173 224 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MUC1P15941 1255 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 HIST1H1BP16401 226 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ERCC2P18074 760 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MYL12AP19105 171 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 IL11P20809 199 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 OR1E1P30953 314 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CORO1AP31146 461 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 IL15P40933 162 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 GRIA1P42261 906 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 RPL21P46778 160 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 HTR5AP47898 357 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SLC11A1P49279 550 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CDC34P49427 236 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CEBPDP49716 269 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 XKP51811 444 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PRKXP51817 358 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 BTG1P62324 171 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MRPS11P82912 194 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TLE4Q04727 773 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 IL24Q13007 206 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 GPR17Q13304 367 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 EXOSC2Q13868 293 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 BAATQ14032 418 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 GK3PQ14409 553 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MESDQ14696 234 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CHI3L2Q15782 390 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NEDD8Q15843 81 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TATDN3Q17R31 274 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SLC5A12Q1EHB4 618 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LRRC26Q2I0M4 334 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ZNF630Q2M218 657 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SOWAHAQ2M3V2 549 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 GOLGA7BQ2TAP0 167 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 KRTAP27-1Q3LI81 207 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 VPS26BQ4G0F5 336 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SBK1Q52WX2 424 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TPRG1LQ5T0D9 272 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SERTAD4-AS1Q5TG53 156 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MEDAGQ5VYS4 303 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MFSD14CQ5VZR4 134 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TTC23Q5W5X9 447 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LAMTOR1Q6IAA8 161 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LPCAT3Q6P1A2 487 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ULK3Q6PHR2 472 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 AFTPHQ6ULP2 937 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CD300LGQ6UXG3 332 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CYHR1Q6ZMK1 362 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 FAM183BPQ6ZVS7 135 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 C1orf186Q6ZWK4 172 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 BIVMQ86UB2 503 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 P2RY8Q86VZ1 359 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 APOBEC3FQ8IUX4 373 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NAXDQ8IW45 347 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 DCUN1D3Q8IWE4 304 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 FOXRED2Q8IWF2 684 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PRSS58Q8IYP2 241 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 FAM71AQ8IYT1 594 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 DEFB107AQ8IZN7 70 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 APCDD1Q8J025 514 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PGAM4Q8N0Y7 254 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 GPR137CQ8N3F9 429 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PARP16Q8N5Y8 322 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MRPL43Q8N983 215 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 RASGEF1AQ8N9B8 481 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 C17orf47Q8NEP4 570 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 OR52M1Q8NGK5 317 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 OR5M1Q8NGP8 315 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 OR9A2Q8NGT5 310 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 OR13D1Q8NGV5 346 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 OR2V1Q8NHB1 315 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 BBS10Q8TAM1 723 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LNX1Q8TBB1 728 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TSEN15Q8WW01 171 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 C1orf54Q8WWF1 131 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SORCS1Q8WY21 1168 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 FCGR1BQ92637 280 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 KIAA1143Q96AT1 154 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PABPC5Q96DU9 382 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ASB9Q96DX5 294 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MED8Q96G25 268 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SENP5Q96HI0 755 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LINC00052Q96N35 136 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms