RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ZNF611Q8N823 705 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 OR8J3Q8NGG0 315 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 LILRB1Q8NHL6 650 aaPredicted RBP10.02□□□□□ -0.81
CLCF1-202ENST00000533438 SLC25A43Q8WUT9 341 aaPredicted RBP10.02□□□□□ -0.81
CLCF1-202ENST00000533438 ANKRD27Q96NW4 1050 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 MDFIQ99750 246 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 CPPED1Q9BRF8 314 aaPredicted RBP10.02□□□□□ -0.81
CLCF1-202ENST00000533438 NANOGQ9H9S0 305 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 EXOSC3Q9NQT5 275 aaKnown RBP10.02□□□□□ -0.81
CLCF1-202ENST00000533438 CTPS2Q9NRF8 586 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 PRSS50Q9UI38 385 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 ZANQ9Y493 2812 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 COL6A5A8TX70 2615 aa10.02□□□□□ -0.81
CLCF1-202ENST00000533438 CLDN24A6NM45 220 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 SULT2B1O00204 365 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 GYG2O15488 501 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 GSNP06396 782 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 FESP07332 822 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 COX5AP20674 150 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 PPIBP23284 216 aaKnown RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 SLC6A2P23975 617 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 IL32P24001 234 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 CHI3L1P36222 383 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 PSME3P61289 254 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 CSNK2A1P68400 391 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 TXNL4AP83876 142 aaKnown RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 CHRNEQ04844 493 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 CAPRIN1Q14444 709 aaKnown RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 PDK3Q15120 406 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 SYPL1Q16563 259 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 GPAT3Q53EU6 434 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 CLEC9AQ6UXN8 241 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 Q71RC1 249 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 GRINAQ7Z429 371 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 RNF130Q86XS8 419 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 ADGRG3Q86Y34 549 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 DEFB107AQ8IZN7 70 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 TMEM171Q8WVE6 324 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 HSD17B8Q92506 261 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 AKAP1Q92667 903 aaKnown RBP eCLIP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 KISS1RQ969F8 398 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 ARL5BQ96KC2 179 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 SH3GL1Q99961 368 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 USB1Q9BQ65 265 aaKnown RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 BDH2Q9BUT1 245 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 POTEKPQ9BYX7 375 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 SLC38A1Q9H2H9 487 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 TPT1P8Q9HAU6 139 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 SPAG4Q9NPE6 437 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 ZNF701Q9NV72 531 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 ABCD2Q9UBJ2 740 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 CHRNA9Q9UGM1 479 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 PRPF19Q9UMS4 504 aaKnown RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 AP3M1Q9Y2T2 418 aa10.01□□□□□ -0.81
CLCF1-202ENST00000533438 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
CLCF1-202ENST00000533438 IGKV3D-15A0A087WSY6 115 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 ZNF716A6NP11 495 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 H7C1Q1 480 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 CLIC1O00299 241 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 GSC2O15499 205 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 DNAJC8O75937 253 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 CNOT4O95628 575 aaKnown RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 PMS2P2O95744 297 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 CHRM4P08173 479 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 DANCRP0C864 163 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 RPS4Y1P22090 263 aaKnown RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 FKBP2P26885 142 aaKnown RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 RYKP34925 604 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 MAGEA8P43361 318 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 SPATS1Q496A3 300 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 LRRC74BQ6ZQY2 392 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 BHLHA15Q7RTS1 189 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 HMGN2P46Q86SG4 172 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 ATG4DQ86TL0 474 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 CMIPQ8IY22 773 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 SLC15A3Q8IY34 581 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 ARHGAP24Q8N264 748 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 ANKFN1Q8N957 763 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 ZNF563Q8TA94 476 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 CNOT9Q92600 299 aaKnown RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 AURKBQ96GD4 344 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 TRNT1Q96Q11 434 aaKnown RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 MMADHCQ9H3L0 296 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 CXorf56Q9H5V9 222 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 NGBQ9NPG2 151 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 CMTM6Q9NX76 183 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 TMEM181Q9P2C4 612 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 CORO2BQ9UQ03 480 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 LIPT1Q9Y234 373 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 HDGFL3Q9Y3E1 203 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 RNF115Q9Y4L5 304 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 SPIN1Q9Y657 262 aaPredicted RBP10□□□□□ -0.81
CLCF1-202ENST00000533438 JMJD1CQ15652 2540 aa10□□□□□ -0.81
CLCF1-202ENST00000533438 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
CLCF1-202ENST00000533438 TRIM64A6NGJ6 449 aa9.99□□□□□ -0.81
CLCF1-202ENST00000533438 TRIM64BA6NI03 449 aa9.99□□□□□ -0.81
CLCF1-202ENST00000533438 AGAP5A6NIR3 686 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms