RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 RIIAD1A6NNX1 92 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 CDC42EP2O14613 210 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 MYL12BO14950 172 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 PRODHO43272 600 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 NDUFB5O43674 189 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 TLX2O43763 284 aaPredicted RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 MAN1A2O60476 641 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 EIF4E2O60573 245 aaKnown RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 TSPAN2O60636 221 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 GABARAPO95166 117 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 WISP1O95388 367 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 RAB36O95755 333 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 IFNGP01579 166 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 UMODP07911 640 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 STSP08842 583 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 MYL12AP19105 171 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 CCNA2P20248 432 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 MAKP20794 623 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 ABCD3P28288 659 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 EVI2BP34910 448 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 FOLR3P41439 243 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SLC9A3P48764 834 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 PNLIPRP2P54317 469 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 CDH11P55287 796 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SLC26A5P58743 744 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 RNF4P78317 190 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.4□□□□□ -1.38
SOX6-215ENST00000533411 CRYZQ08257 329 aaKnown RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 C1DQ13901 141 aaKnown RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 CD226Q15762 336 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 IGFBP7Q16270 282 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SYT6Q5T7P8 510 aaPredicted RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 SLC30A6Q6NXT4 461 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 MRPL14Q6P1L8 145 aaKnown RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 ARHGAP11AQ6P4F7 1023 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SMARCD3Q6STE5 483 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 TMPRSS11FQ6ZWK6 438 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 CPEB2Q7Z5Q1 589 aaKnown RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 P2RY8Q86VZ1 359 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 MISPQ8IVT2 679 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 OR5L2Q8NGL0 311 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 OR4Q3Q8NH05 313 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 OR8K3Q8NH51 312 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 ZNF563Q8TA94 476 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SLC22A8Q8TCC7 542 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 THAP4Q8WY91 577 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 C3orf49Q96BT1 292 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 ARSGQ96EG1 525 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SGTBQ96EQ0 304 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 SAMD8Q96LT4 415 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 ZNF582Q96NG8 517 aaPredicted RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 MESP1Q9BRJ9 268 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 ZNF426Q9BUY5 554 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 IFT27Q9BW83 186 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 FUNDC2Q9BWH2 189 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 MND1Q9BWT6 205 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 CDCA4Q9BXL8 241 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 LAT2Q9GZY6 243 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 C12orf10Q9HB07 376 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 HHATLQ9HCP6 504 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 AMBNQ9NP70 447 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 C20orf141Q9NUB4 165 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 IL20Q9NYY1 176 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.4□□□□□ -1.38
SOX6-215ENST00000533411 PPIEQ9UNP9 301 aaKnown RBP6.4□□□□□ -1.38
SOX6-215ENST00000533411 ERGIC3Q9Y282 383 aa6.4□□□□□ -1.38
SOX6-215ENST00000533411 CPAMD8Q8IZJ3 1885 aa6.4□□□□□ -1.39
SOX6-215ENST00000533411 HELZ2Q9BYK8 2649 aaKnown RBP6.4□□□□□ -1.39
SOX6-215ENST00000533411 TENM4Q6N022 2769 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 TRAV27A0A087WT01 109 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 A0A087WUJ7 227 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 KDM4EB2RXH2 506 aaPredicted RBP6.39□□□□□ -1.39
SOX6-215ENST00000533411 ALG1L2C9J202 215 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 GNB5O14775 395 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 SLC22A1O15245 554 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 SURF4O15260 269 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 HCRTR2O43614 444 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 SCO2O43819 266 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 CDC40O60508 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
SOX6-215ENST00000533411 OR7A10O76100 309 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 NUDT14O95848 222 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 IGF2P01344 180 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 LCKP06239 509 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 CD63P08962 238 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 GP1BBP13224 206 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 ZNF3P17036 446 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 PGCP20142 388 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 PAICSP22234 425 aaKnown RBP6.39□□□□□ -1.39
SOX6-215ENST00000533411 CASRP41180 1078 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 SLC15A1P46059 708 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 SUMO3P55854 103 aaPredicted RBP6.39□□□□□ -1.39
SOX6-215ENST00000533411 ZNF117Q03924 483 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 RAB40BQ12829 278 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 KLRB1Q12918 225 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 DYNC1I2Q13409 638 aaKnown RBP6.39□□□□□ -1.39
SOX6-215ENST00000533411 LSAMPQ13449 338 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 CBFBQ13951 182 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 IRF3Q14653 427 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 EXT1Q16394 746 aa6.39□□□□□ -1.39
SOX6-215ENST00000533411 TIGD6Q17RP2 521 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms