RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EIF1BO60739 113 aaKnown RBP18.18■□□□□ 0.5
CCS-208ENST00000533244 FMO6PO60774 539 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 FZD7O75084 574 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 POU2F1P14859 743 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 IDUAP35475 653 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 SLC16A1P53985 500 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 OR2B6P58173 313 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 SLC35A1P78382 337 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 FAM91A1Q658Y4 838 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 TFAP2EQ6VUC0 442 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 OR52E4Q8NGH9 312 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 ZNF300Q96RE9 604 aaPredicted RBP18.18■□□□□ 0.5
CCS-208ENST00000533244 HOPXQ9BPY8 73 aaPredicted RBP18.18■□□□□ 0.5
CCS-208ENST00000533244 PRR14Q9BWN1 585 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 ARL2BPQ9Y2Y0 163 aa18.18■□□□□ 0.5
CCS-208ENST00000533244 CCT8L1PA6NM43 557 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 RAMP1O60894 148 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 EPXP11678 715 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 FPR1P21462 350 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 UGT2B10P36537 528 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 EGR4Q05215 589 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 DAZAP2Q15038 168 aaPredicted RBP18.17■□□□□ 0.5
CCS-208ENST00000533244 NPTX1Q15818 432 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 C1orf140Q5VVS0 124 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 PAQR6Q6TCH4 344 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 OR2T12Q8NG77 320 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 LINC01560Q8TB33 94 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 PIGXQ8TBF5 258 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 DNAJA4Q8WW22 397 aaPredicted RBP18.17■□□□□ 0.5
CCS-208ENST00000533244 RASSF5Q8WWW0 418 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 DACH2Q96NX9 599 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 C12orf49Q9H741 205 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 RPS6KB2Q9UBS0 482 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 CSMD1Q96PZ7 3565 aa18.17■□□□□ 0.5
CCS-208ENST00000533244 FREM1Q5H8C1 2179 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 A0A0B4J2E0 115 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 A0A1B0GX12 115 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 M0R3H8 397 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 GPIP06744 558 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 NUDT2P50583 147 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 KRTAP10-9P60411 292 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 NCALDP61601 193 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 CEACAM7Q14002 265 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 OR1Q1Q15612 314 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 ALG10BQ5I7T1 473 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 ULK3Q6PHR2 472 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 BEND4Q6ZU67 534 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 STK32CQ86UX6 486 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 RANBP3LQ86VV4 465 aaPredicted RBP18.16■□□□□ 0.5
CCS-208ENST00000533244 MICU2Q8IYU8 434 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 OR4D11Q8NGI4 311 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 OR6T1Q8NGN1 323 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 SLC38A4Q969I6 547 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 PTDSS2Q9BVG9 487 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 TESMINQ9Y4I5 508 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 PDZD2O15018 2839 aa18.16■□□□□ 0.5
CCS-208ENST00000533244 IGKV1D-42A0A075B6H8 117 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 SH3D21A4FU49 640 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ELOA3DA6NLF2 546 aaPredicted RBP18.15■□□□□ 0.5
CCS-208ENST00000533244 FTCDNL1E5RQL4 147 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 NME4O00746 187 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 PNMTP11086 282 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 OR3A2P47893 321 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ELOA3BQ3SY89 546 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 SWT1Q5T5J6 900 aaKnown RBP18.15■□□□□ 0.5
CCS-208ENST00000533244 STAC2Q6ZMT1 411 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 CCDC103Q8IW40 242 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 GABRG1Q8N1C3 465 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ANKS4BQ8N8V4 417 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ELOA3Q8NG57 546 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 SLC47A1Q96FL8 570 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 LURAP1Q96LR2 239 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 NAA11Q9BSU3 229 aaPredicted RBP18.15■□□□□ 0.5
CCS-208ENST00000533244 PCDHAC1Q9H158 963 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 TMEM27Q9HBJ8 222 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 EMC3Q9P0I2 261 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ABCD2Q9UBJ2 740 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 POLQO75417 2590 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 A0A087WUJ7 227 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ELOVL7A1L3X0 281 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 A6NNC1 897 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 C16orf97H3BN30 126 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 CTAG2O75638 210 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 P2RY4P51582 365 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 SLC7A2P52569 658 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 OR7A5Q15622 319 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 EXOC3L2Q2M3D2 409 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 ZNF613Q6PF04 617 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 C5orf46Q6UWT4 87 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 GALNT5Q7Z7M9 940 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 RBM45Q8IUH3 476 aaKnown RBP18.15■□□□□ 0.5
CCS-208ENST00000533244 MFSD8Q8NHS3 518 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 SLC26A7Q8TE54 656 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 CCT8L2Q96SF2 557 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 MCHR1Q99705 422 aa18.15■□□□□ 0.5
CCS-208ENST00000533244 GMPR2Q9P2T1 348 aaKnown RBP18.15■□□□□ 0.5
CCS-208ENST00000533244 CSMD2Q7Z408 3487 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 AQP7P3A6NL99 342 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 GPR171O14626 319 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 SHOX2O60902 331 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms