RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 BAG5Q9UL15 447 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF232Q9UNY5 417 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 IFT52Q9Y366 437 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 WIF1Q9Y5W5 379 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 DSPPQ9NZW4 1301 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 CR1P17927 2039 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 USF3Q68DE3 2245 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 ANK3Q12955 4377 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 NPIPA5A0A0B4J1W7 369 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 A0A1W2PNV4 684 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 PRAMEF25A6NGN4 478 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 AGAP5A6NIR3 686 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 NPIPA7E9PJI5 369 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 CLOCKO15516 846 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 REM1O75628 298 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 IL33O95760 270 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 FESP07332 822 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 PABPC4LP0CB38 370 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 NPIPA8P0DM63 369 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 FCGR1AP12314 374 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 TNFRSF1BP20333 461 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR1E2P47887 323 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 MAPK14Q16539 360 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 DECR1Q16698 335 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 GLIPR1L2Q4G1C9 344 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 LIPNQ5VXI9 398 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 DHRS4L2Q6PKH6 230 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 TAGAPQ8N103 731 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 C17orf47Q8NEP4 570 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 PROX1Q92786 737 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 C7orf34Q96L11 122 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 G6PC3Q9BUM1 346 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 PINK1Q9BXM7 581 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 SHARPINQ9H0F6 387 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 SEMA6AQ9H2E6 1030 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 CACYBPQ9HB71 228 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 CLCF1Q9UBD9 225 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 STOML1Q9UBI4 398 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 KCNE5Q9UJ90 142 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 RIMS3Q9UJD0 308 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 MRTO4Q9UKD2 239 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 LAMP3Q9UQV4 416 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 SH3GLB1Q9Y371 365 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 FREM3P0C091 2139 aa10.12□□□□□ -0.79
TRAPPC4-213ENST00000533149 CENPVL1A0A0U1RR11 272 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 hCG_2039718K7EN88 272 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ACOX3O15254 700 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 KCNAB3O43448 404 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 KIAA0513O60268 411 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 LGI1O95970 557 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 CST1P01037 141 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 FABP3P05413 133 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 DBIP07108 87 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 RPS4Y1P22090 263 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ACVR1BP36896 505 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 MAGEA2P43356 314 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ATP12AP54707 1039 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 RPP38P78345 283 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 VLDLRP98155 873 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 SRYQ05066 204 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 LARS2Q15031 903 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ATP6AP1Q15904 470 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 IQCCQ4KMZ1 466 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 FNDC7Q5VTL7 733 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR2A2Q6IF42 318 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF474Q6S9Z5 364 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF550Q7Z398 422 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 PIWIL3Q7Z3Z3 882 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 TSEN54Q7Z6J9 526 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 COMTD1Q86VU5 262 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 CARM1Q86X55 608 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 GRAMD2AQ8IUY3 354 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 PRR22Q8IZ63 422 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 CLIP4Q8N3C7 705 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 FAM83FQ8NEG4 500 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR4C3Q8NH37 302 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 NRG4Q8WWG1 115 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 GEMIN6Q8WXD5 167 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 TMBIM1Q969X1 311 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 GTPBP3Q969Y2 492 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 EFHD2Q96C19 240 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 STARD4Q96DR4 205 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 CENPNQ96H22 339 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 TMEM41AQ96HV5 264 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 WFDC6Q9BQY6 131 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 SLCO5A1Q9H2Y9 848 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 DNAJB9Q9UBS3 223 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF443Q9Y2A4 671 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 HEATR5AQ86XA9 2040 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 NINQ8N4C6 2090 aa10.11□□□□□ -0.79
TRAPPC4-213ENST00000533149 NPIPB9F8W1W9 429 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 OVOL3O00110 214 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 GNGT2O14610 69 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 TSPAN2O60636 221 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 DEAF1O75398 565 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 UGT2B17O75795 530 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 DIRAS1O95057 198 aa10.1□□□□□ -0.79
TRAPPC4-213ENST00000533149 UTS2O95399 124 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms