RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 NR1H2P55055 460 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 TXNL4AP83876 142 aaKnown RBP16.75■□□□□ 0.27
SSH3-209ENST00000532600 ITGADQ13349 1161 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 P2RY6Q15077 328 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 RABL3Q5HYI8 236 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 MRPL2Q5T653 305 aaKnown RBP16.75■□□□□ 0.27
SSH3-209ENST00000532600 ALKBH2Q6NS38 261 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 NANOGP8Q6NSW7 305 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 C8orf82Q6P1X6 216 aaPredicted RBP16.75■□□□□ 0.27
SSH3-209ENST00000532600 CMIPQ8IY22 773 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 SLC38A5Q8WUX1 472 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 WDR60Q8WVS4 1066 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 KISS1RQ969F8 398 aaPredicted RBP16.75■□□□□ 0.27
SSH3-209ENST00000532600 PERPQ96FX8 193 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 MTHFD2LQ9H903 347 aaPredicted RBP16.75■□□□□ 0.27
SSH3-209ENST00000532600 NANOGQ9H9S0 305 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 RLIMQ9NVW2 624 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 OSGIN1Q9UJX0 560 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 CHST2Q9Y4C5 530 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 ZANQ9Y493 2812 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 ZC3H12DA2A288 527 aaKnown RBP16.74■□□□□ 0.27
SSH3-209ENST00000532600 HS3ST1O14792 307 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 LYZL6O75951 148 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 NR2F1P10589 423 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 IMPDH2P12268 514 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 IL32P24001 234 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 CSNK2A1P68400 391 aaPredicted RBP16.74■□□□□ 0.27
SSH3-209ENST00000532600 H3F3AP84243 136 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 EPS8Q12929 822 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 FADDQ13158 208 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 PDK3Q15120 406 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 RPS26P11Q5JNZ5 115 aaPredicted RBP16.74■□□□□ 0.27
SSH3-209ENST00000532600 NCMAPQ5T1S8 102 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 BHLHA15Q7RTS1 189 aaPredicted RBP16.74■□□□□ 0.27
SSH3-209ENST00000532600 VRK2Q86Y07 508 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 PTOV1Q86YD1 416 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 CCDC103Q8IW40 242 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 AKAP1Q92667 903 aaKnown RBP eCLIP16.74■□□□□ 0.27
SSH3-209ENST00000532600 NEUROG1Q92886 237 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 KAT8Q9H7Z6 458 aaKnown RBP16.74■□□□□ 0.27
SSH3-209ENST00000532600 A4GALTQ9NPC4 353 aa16.74■□□□□ 0.27
SSH3-209ENST00000532600 NAV3Q8IVL0 2385 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 USF3Q68DE3 2245 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 TMED7-TICAM2A0A0A6YYA0 188 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 DPRXA6NFQ7 191 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 FAAHO00519 579 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 BCHEP06276 602 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 INHBBP09529 407 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 PAX1P15863 534 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 COX5AP20674 150 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 PPIBP23284 216 aaKnown RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 SLC6A2P23975 617 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 TACR3P29371 465 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 PTH2RP49190 550 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 ANXA11P50995 505 aaKnown RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 GCNT6Q5T4J0 391 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 ZNF836Q6ZNA1 936 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 Q71RC1 249 aaPredicted RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 YTHDF3Q7Z739 585 aaKnown RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 GALNT5Q7Z7M9 940 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 BIVMQ86UB2 503 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 P3H2Q8IVL5 708 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 ZNF611Q8N823 705 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 PCYOX1LQ8NBM8 494 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 HSD17B8Q92506 261 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 CMTM5Q96DZ9 223 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 TMEM19Q96HH6 336 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 Q96MF0 132 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 RSPO3Q9BXY4 272 aaPredicted RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 POTEKPQ9BYX7 375 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 GSX2Q9BZM3 304 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 ADAM19Q9H013 955 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 RAD21L1Q9H4I0 556 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 GMPR2Q9P2T1 348 aaKnown RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 P2RX2Q9UBL9 471 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 TMED7Q9Y3B3 224 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 HDGFL3Q9Y3E1 203 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 SPIN1Q9Y657 262 aaPredicted RBP16.73■□□□□ 0.27
SSH3-209ENST00000532600 CADP27708 2225 aa16.73■□□□□ 0.27
SSH3-209ENST00000532600 CDHR4A6H8M9 788 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 EVPLLA8MZ36 301 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 ARHGEF9O43307 516 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 NPPAP01160 153 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 IGHV3-9P01782 118 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 DBIP07108 87 aaKnown RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 GKN3PP0CG01 181 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 ARAFP10398 606 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 ACAA2P42765 397 aaKnown RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 SLC1A3P43003 542 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 CLK1P49759 484 aaKnown RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 POLR2HP52434 150 aaKnown RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 SLC16A1P53985 500 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 FOXG1P55316 489 aaPredicted RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 ADAM5Q6NVV9 412 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 PRSS57Q6UWY2 283 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 NET1Q7Z628 596 aaPredicted RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 CALHM3Q86XJ0 350 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 CLIP4Q8N3C7 705 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 OR8J3Q8NGG0 315 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms