RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 OR1J4Q8NGS1 313 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 CNOT9Q92600 299 aaKnown RBP8.47□□□□□ -1.05
VPS26B-207ENST00000532160 TAMM41Q96BW9 452 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
VPS26B-207ENST00000532160 CIB1Q99828 191 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 HOXD1Q9GZZ0 328 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 RBM38Q9H0Z9 239 aaKnown RBP8.47□□□□□ -1.05
VPS26B-207ENST00000532160 BCL2L10Q9HD36 194 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 POLE3Q9NRF9 147 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 QPCTLQ9NXS2 382 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 DNAJB9Q9UBS3 223 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 FBXL2Q9UKC9 423 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 ABCG2Q9UNQ0 655 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 ZNF443Q9Y2A4 671 aaPredicted RBP8.47□□□□□ -1.05
VPS26B-207ENST00000532160 CHST2Q9Y4C5 530 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 ORC6Q9Y5N6 252 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 GPC6Q9Y625 555 aaPredicted RBP8.47□□□□□ -1.05
VPS26B-207ENST00000532160 MED12LQ86YW9 2145 aa8.47□□□□□ -1.05
VPS26B-207ENST00000532160 ARID1AO14497 2285 aa8.46□□□□□ -1.05
VPS26B-207ENST00000532160 A0A1W2PQD3 144 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TCRBV5S2A0A599 114 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ANKRD33BA6NCL7 494 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 SHISA8B8ZZ34 492 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 GTPBP1O00178 669 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 DVL2O14641 736 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 HCRTR2O43614 444 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ADAM11O75078 769 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 MFN2O95140 757 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 SNX4O95219 450 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 EPPINO95925 133 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 CSTAP01040 98 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 DBIP07108 87 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 NGFRP08138 427 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 GKN3PP0CG01 181 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 UBL4AP11441 157 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 NID1P14543 1247 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ETS2P15036 469 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 CDH2P19022 906 aaPredicted RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 GGT1P19440 569 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TNFRSF1BP20333 461 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RPS4Y1P22090 263 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 DNASE1P24855 282 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 LCN1P31025 176 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RYKP34925 604 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ALDH3A2P51648 485 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 CCR4P51679 360 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 AGFG1P52594 562 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ZNF136P52737 540 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RAD23AP54725 363 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ADAM8P78325 824 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 HOXC5Q00444 222 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 SNTA1Q13424 505 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 FGFBP1Q14512 234 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TOMM20Q15388 145 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 DUSP7Q16829 419 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 FBXL19-AS1Q494R0 122 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 DCST1Q5T197 706 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 MRPL2Q5T653 305 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TIGD3Q6B0B8 471 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 HMBOX1Q6NT76 420 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TMEM81Q6P7N7 255 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 PAMR1Q6UXH9 720 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 LINC00299Q6ZSB3 139 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 AMIGO2Q86SJ2 522 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 PLCZ1Q86YW0 608 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 HIPK1Q86Z02 1210 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ARMC8Q8IUR7 673 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 METTL25Q8N6Q8 603 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ZNF555Q8NEP9 628 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 OR2M3Q8NG83 312 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 OR4K17Q8NGC6 315 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 FAM222BQ8WU58 562 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RNASE6Q93091 150 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 FAM162AQ96A26 154 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ZNF524Q96C55 264 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 NTNG2Q96CW9 530 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TMEM41AQ96HV5 264 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ALPK1Q96QP1 1244 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TIMP4Q99727 224 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 NPAS1Q99742 590 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RBM4BQ9BQ04 359 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 WFDC6Q9BQY6 131 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 CHID1Q9BWS9 393 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 SEMA6AQ9H2E6 1030 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 UBQLN3Q9H347 655 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 USE1Q9NZ43 259 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 SLC6A5Q9Y345 797 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 HSPE1-MOB4S4R3N1 261 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 TLN2Q9Y4G6 2542 aa8.46□□□□□ -1.06
VPS26B-207ENST00000532160 FN1P02751 2386 aaKnown RBP8.46□□□□□ -1.06
VPS26B-207ENST00000532160 JMJD1CQ15652 2540 aa8.45□□□□□ -1.06
VPS26B-207ENST00000532160 AHRRA9YTQ3 701 aa8.45□□□□□ -1.06
VPS26B-207ENST00000532160 AP3D1O14617 1153 aa8.45□□□□□ -1.06
VPS26B-207ENST00000532160 ZNF264O43296 627 aa8.45□□□□□ -1.06
VPS26B-207ENST00000532160 SERPINB7O75635 380 aa8.45□□□□□ -1.06
VPS26B-207ENST00000532160 TRAPPC6AO75865 159 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms