RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 RNF138Q8WVD3 245 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 PHYHIPQ92561 330 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 OR5M11Q96RB7 305 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 TNFRSF13CQ96RJ3 184 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CRB3Q9BUF7 120 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 MCCC2Q9HCC0 563 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 SLC22A11Q9NSA0 550 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 BABAM2Q9NXR7 383 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CTSFQ9UBX1 484 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CARD8Q9Y2G2 431 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CORINQ9Y5Q5 1042 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 IGLV3-32A0A0A0MS00 114 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 LOC100506127A0A0U1RQW1 187 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 DAPL1A0PJW8 107 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 METTL15A6NJ78 407 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 NPIPB13A6NJU9 1138 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 A8MVM7 634 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 NPIPB4C9JG80 1138 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 M0R129 80 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 TP53I11O14683 189 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 ICOSLGO75144 302 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 SERPINA3P01011 423 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 SP9P0CG40 484 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 LIMS3P0CW19 117 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 LIMS4P0CW20 117 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 ETV5P41161 510 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 ENTPD1P49961 510 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 ETV1P50549 477 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 PPP5CP53041 499 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 FXYD6P3P58550 94 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 NCS1P62166 190 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 EIF3IQ13347 325 aaKnown RBP11.21□□□□□ -0.61
CHD7-211ENST00000532149 CCDC58Q4VC31 144 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 PLBD1Q6P4A8 553 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 PAPD4Q6PIY7 484 aaKnown RBP11.21□□□□□ -0.61
CHD7-211ENST00000532149 ZNF485Q8NCK3 441 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 APCDD1LQ8NCL9 501 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 OR51A7Q8NH64 312 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 M1APQ8TC57 530 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 THRSPQ92748 146 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 ERMAPQ96PL5 475 aaPredicted RBP11.21□□□□□ -0.61
CHD7-211ENST00000532149 CHCHD6Q9BRQ6 235 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 B3GNT4Q9C0J1 378 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 NUAK2Q9H093 628 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 MMP25Q9NPA2 562 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 AKIP1Q9NQ31 210 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 RXFP3Q9NSD7 469 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 TBCCD1Q9NVR7 557 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 TOR4AQ9NXH8 423 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 GPR52Q9Y2T5 361 aa11.21□□□□□ -0.61
CHD7-211ENST00000532149 SPIN1Q9Y657 262 aaPredicted RBP11.21□□□□□ -0.61
CHD7-211ENST00000532149 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 ANKUB1A6NFN9 424 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CENPBD1B2RD01 187 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 FAM47E-STBD1D6RA91 191 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 LOC110117498-PIK3R3F6TDL0 507 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 ETV2O00321 342 aaPredicted RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 KPNA4O00629 521 aaPredicted RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 PHYHO14832 338 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 ZNF208O43345 1280 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CBFA2T3O75081 653 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CH25HO95992 272 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 PDGFBP01127 241 aaPredicted RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 SBK2P0C263 348 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 SLC2A5P22732 501 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 PTBP1P26599 531 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHD7-211ENST00000532149 ITPKBP27987 946 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 SDHAP31040 664 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 MPLP40238 635 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CRYBB2P43320 205 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CCR4P51679 360 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 SRSF5Q13243 272 aaKnown RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 SSX1Q16384 188 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 NNATQ16517 81 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 SPANXN2Q5MJ10 180 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 FAM205BPQ63HN1 556 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 ZNF322Q6U7Q0 402 aaPredicted RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 ZNF517Q6ZMY9 492 aaPredicted RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 BMPERQ8N8U9 685 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 FAM98AQ8NCA5 519 aaKnown RBP11.2□□□□□ -0.62
CHD7-211ENST00000532149 ZNF248Q8NDW4 579 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 PTP4A1Q93096 173 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CDC6Q99741 560 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 OR51E2Q9H255 320 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CPNE5Q9HCH3 593 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 TAS2R10Q9NYW0 307 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 CLEC2DQ9UHP7 191 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 TMEM14AQ9Y6G1 99 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 ASXL3Q9C0F0 2248 aa11.2□□□□□ -0.62
CHD7-211ENST00000532149 ADAMTS9Q9P2N4 1935 aa11.19□□□□□ -0.62
CHD7-211ENST00000532149 TRAV27A0A087WT01 109 aa11.19□□□□□ -0.62
CHD7-211ENST00000532149 IQCMA0A1B0GVH7 501 aa11.19□□□□□ -0.62
CHD7-211ENST00000532149 OR2W5A6NFC9 320 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms