RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TPD52L3Q96J77 140 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 HSH2DQ96JZ2 352 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 OR5B2Q96R09 309 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 TMEM43Q9BTV4 400 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 TIGARQ9NQ88 270 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 Q9UFV3 132 aa12.95□□□□□ -0.34
CPSF1-206ENST00000531480 A0A1W2PNR3 127 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 HSPB2A8KAH6 182 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 FTCDNL1E5RQL4 147 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 AQP8O94778 261 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 PRSS23O95084 383 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 OR5F1O95221 314 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 ZNF682O95780 498 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 IL18BPO95998 194 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 IL2RAP01589 272 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 IMPDH2P12268 514 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 SMSP52788 366 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 CSNK2A1P68400 391 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-206ENST00000531480 FLOT2Q14254 428 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 HSPB2Q16082 182 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 OR2A2Q6IF42 318 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 FAM86B1Q8N7N1 296 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 ATP6V1C2Q8NEY4 427 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 ASB5Q8WWX0 329 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 MPP4Q96JB8 637 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 CLPTM1LQ96KA5 538 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 NSMCE2Q96MF7 247 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 PRSS27Q9BQR3 290 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 PTDSS2Q9BVG9 487 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 YY1AP1Q9H869 796 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 GP6Q9HCN6 339 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 ZNF629Q9UEG4 869 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-206ENST00000531480 MCTS1Q9ULC4 181 aaKnown RBP12.94□□□□□ -0.34
CPSF1-206ENST00000531480 A4GNTQ9UNA3 340 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 RNF6Q9Y252 685 aa12.94□□□□□ -0.34
CPSF1-206ENST00000531480 SPTAN1Q13813 2472 aaKnown RBP12.94□□□□□ -0.34
CPSF1-206ENST00000531480 ADGRG4Q8IZF6 3080 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 NAV2Q8IVL1 2488 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 TCRBV5S2A0A599 114 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 LIPT2A6NK58 231 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-206ENST00000531480 CPSF4LA6NMK7 179 aaKnown RBP12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ANKRD65E5RJM6 399 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 SULT2B1O00204 365 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 FFAR1O14842 300 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 SMAD9O15198 467 aaKnown RBP12.93□□□□□ -0.34
CPSF1-206ENST00000531480 TNFSF13O75888 250 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 PDE5AO76074 875 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 PRKD3O94806 890 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 IGF2P01344 180 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 IFNW1P05000 195 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 UMPSP11172 480 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ATP6V1B2P21281 511 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 CHRNB4P30926 498 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 CDSNQ15517 529 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 SGCBQ16585 318 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 EEF1A1P5Q5VTE0 462 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ABLIM2Q6H8Q1 611 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 PLXDC2Q6UX71 529 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 GDF7Q7Z4P5 450 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 MRGPRGQ86SM5 289 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 LILRB4Q8NHJ6 448 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 PYURFQ96I23 114 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 PRRC1Q96M27 445 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 SFXN3Q9BWM7 321 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 SLC19A3Q9BZV2 496 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 DCLRE1BQ9H816 532 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 SLC7A8Q9UHI5 535 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ING1Q9UK53 422 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-206ENST00000531480 POMPQ9Y244 141 aa12.93□□□□□ -0.34
CPSF1-206ENST00000531480 UTP20O75691 2785 aaKnown RBP12.93□□□□□ -0.34
CPSF1-206ENST00000531480 ICE1Q9Y2F5 2266 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 AQP12BA6NM10 295 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 EIF1BO60739 113 aaKnown RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 CYTIPO60759 359 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 SYNGR4O95473 234 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 TFPIP10646 304 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 CCNA2P20248 432 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 ENPP1P22413 925 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 CTSSP25774 331 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 P2RY4P51582 365 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 HCFC1P51610 2035 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 ACTR3P61158 418 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 SLC35A1P78382 337 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 ELF3P78545 371 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 PIN1Q13526 163 aaPredicted RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 PDK3Q15120 406 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 RNPS1Q15287 305 aaKnown RBP12.92□□□□□ -0.34
CPSF1-206ENST00000531480 PAQR6Q6TCH4 344 aa12.92□□□□□ -0.34
CPSF1-206ENST00000531480 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms