RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 Q9UFV3 132 aa13.7□□□□□ -0.22
CCS-206ENST00000530961 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
CCS-206ENST00000530961 CPSF4LA6NMK7 179 aaKnown RBP13.69□□□□□ -0.22
CCS-206ENST00000530961 EBAG9O00559 213 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 CHP2O43745 196 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 EIF1BO60739 113 aaKnown RBP13.69□□□□□ -0.22
CCS-206ENST00000530961 NPIPB7O75200 414 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 DNAJC8O75937 253 aaPredicted RBP13.69□□□□□ -0.22
CCS-206ENST00000530961 OR5F1O95221 314 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 STAMBPO95630 424 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 TNFRSF1BP20333 461 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 ENPP1P22413 925 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 CTSSP25774 331 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 OPRM1P35372 400 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 AGFG1P52594 562 aaKnown RBP13.69□□□□□ -0.22
CCS-206ENST00000530961 TAS2R41P59536 307 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 SLC35A1P78382 337 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 ZNF239Q16600 458 aaKnown RBP13.69□□□□□ -0.22
CCS-206ENST00000530961 MTX3Q5HYI7 312 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 DEF8Q6ZN54 512 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 DHFR2Q86XF0 187 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 SLC43A2Q8N370 569 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 LILRB4Q8NHJ6 448 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 PYURFQ96I23 114 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 SRXN1Q9BYN0 137 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
CCS-206ENST00000530961 ZC3H12DA2A288 527 aaKnown RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 DVL2O14641 736 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 OR2T1O43869 369 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 PDE5AO76074 875 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 AQP8O94778 261 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 PRKD3O94806 890 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 AHSA1O95433 338 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 GPIP06744 558 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 TMIGD3P0DMS9 266 aaPredicted RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 IDUAP35475 653 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 OR2B6P58173 313 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 TRAP1Q12931 704 aaKnown RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 RNPS1Q15287 305 aaKnown RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 PPP4R4Q6NUP7 873 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 PGM2L1Q6PCE3 622 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 LINC00114Q6XXX2 140 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 FCRLAQ7L513 359 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 CCDC71Q8IV32 467 aaPredicted RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 CA5BP1Q8WTZ4 195 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 INTS12Q96CB8 462 aaKnown RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 SLC41A3Q96GZ6 507 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 EPYCQ99645 322 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 TMEM43Q9BTV4 400 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 SFXN3Q9BWM7 321 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 TAPBPLQ9BX59 468 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 AMBRA1Q9C0C7 1298 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 MMADHCQ9H3L0 296 aaPredicted RBP13.68□□□□□ -0.22
CCS-206ENST00000530961 GP6Q9HCN6 339 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 NINQ8N4C6 2090 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 SPG11Q96JI7 2443 aa13.68□□□□□ -0.22
CCS-206ENST00000530961 EXPH5Q8NEV8 1989 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 GSC2O15499 205 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 IMPDH2P12268 514 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 ITGA2P17301 1181 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 H3F3AP84243 136 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 EGR4Q05215 589 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 ST3GAL3Q11203 375 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 PIN1Q13526 163 aaPredicted RBP13.67□□□□□ -0.22
CCS-206ENST00000530961 SLC25A35Q3KQZ1 300 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 LCN8Q6JVE9 175 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 PLXDC2Q6UX71 529 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 CCDC121Q6ZUS5 278 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 MCEMP1Q8IX19 187 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 NAXEQ8NCW5 288 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 OR6S1Q8NH40 331 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 MFSD8Q8NHS3 518 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 RNF128Q8TEB7 428 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 ROBO4Q8WZ75 1007 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 MCUR1Q96AQ8 359 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 GMPPAQ96IJ6 420 aaPredicted RBP13.67□□□□□ -0.22
CCS-206ENST00000530961 CLPTM1LQ96KA5 538 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 PRRC1Q96M27 445 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
CCS-206ENST00000530961 SLC19A3Q9BZV2 496 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 TRIM15Q9C019 465 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 RIMS3Q9UJD0 308 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 SLC7A7Q9UM01 511 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 FAM32AQ9Y421 112 aaKnown RBP13.67□□□□□ -0.22
CCS-206ENST00000530961 ENPP4Q9Y6X5 453 aa13.67□□□□□ -0.22
CCS-206ENST00000530961 RP1L1Q8IWN7 2480 aaPredicted RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 TRAV36DV7A0A075B6V5 113 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 LYPD3O95274 346 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 CLDN14O95500 239 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 PLGP00747 810 aaPredicted RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 THY1P04216 161 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 FPR1P21462 350 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 RBM34P42696 430 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms